A first-draft human protein-interaction map
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* Corresponding author: Andrew G Fraser agf@sanger.ac.uk
Genome Biology 2004, 5:R63 doi:10.1186/gb-2004-5-9-r63
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An integrated approach to the prediction of domain-domain interactions Hyunju Lee, Minghua Deng, Fengzhu Sun, Ting Chen BMC Bioinformatics 2006, 7:269 (25 May 2006) |
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Stefan Wuchty BMC Genomics 2006, 7:122 (23 May 2006) |
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Ulysses - an application for the projection of molecular interactions across species Danielle Kemmer, Yong Huang, Sohrab P Shah, Jonathan Lim, Jochen Brumm, Macaire MS Yuen, John Ling, Tao Xu, Wyeth W Wasserman, BF Francis Ouellette Genome Biology 2005, 6:R106 (2 December 2005) Ulysses, a new software for the parallel analysis and display of protein interactions detected in various species, is described. |
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David J Reiss, Iliana Avila-Campillo, Vesteinn Thorsson, Benno Schwikowski, Timothy Galitski BMC Bioinformatics 2005, 6:154 (20 June 2005) |
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Filtering high-throughput protein-protein interaction data using a combination of genomic features Ashwini Patil, Haruki Nakamura BMC Bioinformatics 2005, 6:100 (18 April 2005) Gene ontology annotations, sequence alignment and structural information of Pfam domains have been combined to create a method of validating high-thoroughput protein-protein interaction data that functions with a sensitivity of 90% and specificity of 63%.
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Arun K Ramani, Razvan C Bunescu, Raymond J Mooney, Edward M Marcotte Genome Biology 2005, 6:R40 (15 April 2005) In order to consolidate the known human proteins interactions two tests were developed to measure the relative accuracy of the available interaction data. In addition, 6,580 interactions among 3,737 human proteins were recovered from Medline abstracts and combined with existing interaction data to obtain a network of 31,609 interactions among 7,748 human proteins, accurate to the same degree as the existing data sets. |
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Ontological visualization of protein-protein interactions Harold J Drabkin, Christopher Hollenbeck, David P Hill, Judith A Blake BMC Bioinformatics 2005, 6:29 (11 February 2005) |