Table 3 |
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|
Family specificity of putative miRNA-targeted transcription factors |
||||||
|
Transcription factor gene family |
Predicted number of proteins* |
Predicted number of miRNA targets |
Percent members targeted† |
|||
|
|
||||||
|
Arabidopsis thaliana |
Drosophila melanogaster |
Caenorhabditis elegans |
Saccharomyces cerevisiae |
|||
|
|
||||||
|
MYB superfamily |
190 |
6 |
3 |
10 |
22 |
11.6% |
|
bHLH |
139 |
46 |
25 |
8 |
3 |
2.2% |
|
HB |
89 |
103 |
84 |
9 |
4 |
4.5% |
|
MADS |
82 |
2 |
2 |
4 |
4 |
4.9% |
|
bZIP |
81 |
21 |
25 |
21 |
4 |
4.9% |
|
CCAAT |
36 |
7 |
7 |
6 |
1 |
2.8% |
|
AP2 |
14 |
0 |
0 |
0 |
6 |
42.9% |
|
NAC |
109 |
0 |
0 |
0 |
10 |
9.1% |
|
WRKY |
72 |
0 |
0 |
0 |
1 |
1.4% |
|
GRAS |
32 |
0 |
0 |
0 |
9 |
28.1% |
|
SBP |
16 |
0 |
0 |
0 |
8 |
50.0% |
|
|
||||||
|
*Data in this column are taken from [58]. †The percentage of transcription factors in each family targeted by miRNA in Arabidopsis. |
||||||
|
Wang et al. Genome Biology 2004 5:R65 doi:10.1186/gb-2004-5-9-r65 |
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