|
Gene families identified that are either involved in cell-cycle control or developmental processes |
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| Cellular process |
Putative ID of contig |
Contig |
Expression |
|
|
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| Cell cycle |
Cyclin A2 |
Am_20 |
BL unique |
| Cyclin B1 |
Am_1031 |
BL 3x |
|
| Cyclin B2 |
Am_4185 |
NT unique |
|
| Cyclin B3 |
Am_3173 |
BL unique |
|
| Cyclin E1 |
Am_38 |
BL unique |
|
| Cyclin E2 |
Am_91 |
BL unique |
|
| Cdk4 |
Am_3891 |
BL unique |
|
| Polo kinase |
Am_1717 |
BL unique |
|
| Cdc25A |
Am_3678 |
BL unique |
|
| p27/Kip1 |
Am_4671 |
NT unique |
|
| Cdc20 |
Am_2213 |
BL unique |
|
| Cdh1 |
Am_1148 |
BL unique |
|
| Development |
Wnt8 |
Am_384 |
BL unique |
| Wnt5 |
Am_642 |
BL unique |
|
| FGFR4a |
Am_1393 |
BL unique |
|
| Sonic hedgehog |
Am_3741 |
BL unique |
|
| Activin receptor type II |
Am_3590 |
BL unique |
|
| TGF-β |
Am_4990 |
NT unique |
|
| BMP-1 |
Am_4639 |
NT unique |
|
| Cdx1 |
Am_875 |
BL unique |
|
| Cdx2 |
Am_387 |
BL unique |
|
| HoxA2 |
Am_2387 |
BL unique |
|
| HoxB13 |
Am_4865 |
NT unique |
|
| HoxC4 |
Am_3998 |
BL unique |
|
| HoxC8 |
Am_2910 |
BL unique |
|
| Pax6 |
Am_2945 |
BL unique |
|
| Smad5 |
Am_1420 |
BL unique |
|
| Smad8 |
Am_4665 |
NT unique |
|
| Retinoblastoma binding protein 2 |
Am_2723 |
BL unique |
|
| Beta-catenin |
Am_699 |
BL 3x |
|
| Zic5 |
Am_2068 |
BL unique |
|
| Frizzled 2 |
Am_3243 |
BL unique |
|
| Frizzled 5 |
Am_3451 |
BL unique |
|
| Frizzled 7 |
Am_2334 |
BL unique |
|
| TRIP12 |
Am_6416 |
NT unique |
|
|
The identifier of the A. mexicanum contig is given in the third column. The expression pattern as determined by in silico differential display is shown in column 4. | |||
Habermann et al. Genome Biology 2004 5:R67 doi:10.1186/gb-2004-5-9-r67 |
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