Genome Biology

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Open Access Method

A computational investigation of kinetoplastid trans-splicing

Shuba Gopal1,2*, Saria Awadalla1, Terry Gaasterland2 and George AM Cross3

Author Affiliations

1 Laboratory of Computational Genomics, Rockefeller University, 1230 York Avenue, New York, NY 10021, USA

2 Department of Biological Sciences, Rochester Institute of Technology, 85 Lomb Memorial Drive, Rochester, NY 14623, USA

3 Laboratory of Molecular Parasitology, Rockefeller University, 1230 York Avenue, New York, NY 10021, USA

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Genome Biology 2005, 6:R95 doi:10.1186/gb-2005-6-11-r95

Published: 17 October 2005

Additional files

Additional data File 1:

PDF file describing the method, data, and detailed results for the identification of polypyrimidine tracts within known trans-splicing regions

Format: PDF Size: 49KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional data File 2:

PDF file containing the data and detailed results for our dataset of multiple splice sites with experimental confirmation

Format: PDF Size: 32KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional data File 3:

PDF file containing all the data used in this analysis; the sequence data are presented in the FASTA format

Format: PDF Size: 256KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional data File 4:

PDF file containing the full set of predictions for chromosomes 1 and 3 of Leishmania major

Format: PDF Size: 80KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data