Table 5

Predictions for chromosome 3

Public annotation

Totals

High confidence

Low confidence

No prediction


Forward strand

Protein function assigned

18

14

4

0

Conserved hypothetical

5

5

0

0

Hypothetical

44

40

4

0

Total

67

59

8

0

Reverse strand

Protein function assigned

7

6

1

0

Conserved hypothetical

2

2

0

0

Hypothetical

22

19

3

0

Total

31

27

4

0


Comparison of predicted splice sites with annotation of chromosome 3 of Leishmania major. A total of 98 genes have been annotated on chromosome 3 of L. major [13]. Of these, the method finds a splice site with a high confidence score in all but 12 instances (88%). A splice site was predicted for every gene annotated on this chromosome.

Gopal et al. Genome Biology 2005 6:R95   doi:10.1186/gb-2005-6-11-r95

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