Table 1 |
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|
Divergently transcribed genes, grouped in pairs of which at least one is a target of Sko1, according to a targeted ChIP assay |
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|
Gene |
Promoter |
Target? |
|
|
||
|
FAA1 |
-827/-576 |
Yes |
|
COT1 |
-1,743/-1,561 |
No |
|
PUT4 |
-617/-372 |
Yes |
|
CIN1 |
-1,007/ - |
No |
|
RPI1 |
-606/-451 |
Yes |
|
RHO3 |
-1,611/-1,336 |
No |
|
SPO20 |
-449/-211 |
Yes |
|
SOK2 |
-1,896/- |
No |
|
|
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|
Promoter distances are measured in nucleotides from the start codon of gene 1. Both genes of a pair are counted as positives in evaluating the algorithm described here, since distinguishing members of these pairs is beyond the resolution of Chip2 experimental technology. ChIP, chromatin immunoprecipitation. |
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|
Gibbons et al. Genome Biology 2005 6:R96 doi:10.1186/gb-2005-6-11-r96 |
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