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Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert

Mikael Brosché1 email, Basia Vinocur2, Edward R Alatalo3, Airi Lamminmäki1, Thomas Teichmann4, Eric A Ottow4, Dimitar Djilianov5, Dany Afif6, Marie-Béatrice Bogeat-Triboulot7, Arie Altman2, Andrea Polle4, Erwin Dreyer7, Stephen Rudd8, Lars Paulin3, Petri Auvinen3 and Jaakko Kangasjärvi1 email

1Plant Biology, Department of Biological and Environmental Sciences, University of Helsinki, P.O. Box 65, Viikinkaari 1, FIN-00014 Helsinki, Finland

2The Robert H Smith Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agricultural, Food and Environmental Quality Sciences, The Hebrew University of Jerusalem, Herzl Street, Rehovot 76100, Israel

3Institute of Biotechnology, University of Helsinki, P.O. Box 56, Viikinkaari 4, FIN-00014 Helsinki, Finland

4Institut für Forstbotanik, Georg-August-Universität Göttingen, Büsgenweg 2, 37077 Göttingen, Germany

5AgroBioInstitute, 8 Dragan Tzankov Boulevard, 1164 Sofia, Bulgaria

6UMR INRA-UHP Ecologie et Ecophysiologie Forestières, Faculté des Sciences, F-54506 Vandoeuvre, France

7UMR INRA-UHP Ecologie et Ecophysiologie Forestières, IFR 110 Génomique, Ecophysiologie et Ecologie Fonctionnelle, INRA Nancy, Route d'Amance, F-54280 Champenoux, France

8Turku Centre for Biotechnology, BioCity, Tykistökatu 6, FIN-20521 Turku, Finland

author email corresponding author email

Genome Biology 2005, 6:R101doi:10.1186/gb-2005-6-12-r101

Published: 2 December 2005

Subject areas: Plant biology, Genome studies


Additional files

Additional data file 1:

A description of the cDNA libraries used for EST sequencing.

Format: XLS Size: 18KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 2:

Data from the electronic northern analysis showing the most abundant ESTs in leaf libraries.

Format: XLS Size: 20KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 3:

Data from the electronic northern analysis showing the most abundant ESTs in root libraries.

Format: XLS Size: 17KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 4:

A comparison of the P. euphratica EST collection with ESTs from other Populus species.

Format: XLS Size: 21KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 5:

A comparison of the P. euphratica EST collection with other stress enriched EST collections or microarray experiments.

Format: XLS Size: 101KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 6:

The primers used for real time quantitative RT-PCR.

Format: XLS Size: 16KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 7:

Microarray analysis of leaf samples taken from areas A, B, C and P in the Ein Avdat valley.

Format: DOC Size: 141KB Download file

This file can be viewed with: Microsoft Word Viewer


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