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A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks

John S Reece-Hoyes1, Bart Deplancke2, Jane Shingles1, Christian A Grove2, Ian A Hope1 and Albertha JM Walhout2*

Author Affiliations

1 Institute of Integrative and Comparative Biology, Faculty of Biological Sciences, School of Biology, University of Leeds, Woodhouse Lane, Leeds LS2 9JT, UK

2 Program in Gene Function and Expression and Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, 364 Plantation Street, Lazare Research Building, Room 605, MA 01605, USA

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Genome Biology 2005, 6:R110  doi:10.1186/gb-2005-6-13-r110

Published: 30 December 2005

Additional files

Additional data file 1:

wTF2.0: a collection of predicted C. elegans transcription factors

Format: XLS Size: 130KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 2:

Overview of manually curated genes that were left out of wTF2.0

Format: XLS Size: 64KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 3:

wTF2.0 TFs that contain two distinct DNA binding domains

Format: XLS Size: 22KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 4:

Possible additions to wTF2.0

Format: XLS Size: 48KB Download file

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Additional data file 5:

Alternative splice forms and promoters

Format: XLS Size: 59KB Download file

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Additional data file 6:

Overview of protein interactions involving wTF2.0 TFs

Format: XLS Size: 20KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 7:

Phylogenetic trees of worm TF families

Format: PDF Size: 899KB Download file

This file can be viewed with: Adobe Acrobat Reader

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Additional data file 8:

Putative human wTF2.0 TF homologs and orthologs

Format: XLS Size: 209KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data