Table 2

Candidate redundant worm TF pairs

DNA binding domain

TF 1

TF 2

E-value

% Identity


T-BOX

Y59E9AR.5

TBX-30

E-168

100

T-BOX

TBX-39

TBX-40

E-170

98.9

ZF CCCH

C35D6.4

F38C2.7

E-98

99

COLD BOX

CEY-2

CEY-3

E-96

99.6

ZF C2H2

F47H4.1

Y6G8.3

E-109

99.6

ZF C2H2

H16D19.3

T07D10.3

E-112

58.6

ZF C2H2

LSY-2

LSL-1

E-74

81.1

ZF C2H2

T07G12.10

T07G12.11

E-194

98.8

bHLH

HLH-25

HLH-27

E-139

95.6

bHLH

HLH-28

HLH-29

E-124

99.6

HMG

HMG-3

HMG-4

E-297

99.9

MYB

T10E7.11

T07F8.4

E-132

99.6

PAIRED DOMAIN

EGL-38

PAX-2

E-132

92.4

ZF - PHD

F15E6.1

Y51H4A.12

0

98

ZF - PHD

LET-418

CHD-3

0

99.7

Fork Head

FKH-3

FKH-4

E-199

99.7


E-values and % identity values were obtained via pairwise blastp BLAST. See Table 1 for DNA binding domain abbreviations.

Reece-Hoyes et al. Genome Biology 2005 6:R110   doi:10.1186/gb-2005-6-13-r110

Open Data