Table 1

Number of exons and chromosomal localization of the 78 orthologous D. melanogaster, D pseudoobscura and A. gambiae OXPHOS genes

Cluster ID*

Protein name

D. melanogaster gene name

Number of exons

Map position

FlyBase ID

D. pseudoobscura gene name

Number of exons

Map position

A. gambiae gene name

Number of exons

Map position


Complex I: NADH:ubiquinone oxidoreductase

NUMM

13 kDa A subunit

CG8680

3

2L;25C6

FBgn0031684

Dpse\CG8680

3

4

agEG14117

3

3R;33B

NUFM

13 kDa B subunit

CG6463

3

3L;67E7

FBgn0036100

Dpse\CG6463

3

XR

agEG15380

3

2L22E

NIPM

15 kDa subunit

CG11455

2

2L;21B1-2

FBgn0031228

Dpse\CG11455

2

4

agEG13302

2

3R;35C-D

NUYM

18 kDa subunit

CG12203

3

X;18C7

FBgn0031021

Dpse\CG12203

3

XL

agEG18985

4

2L;27A

NUPM

19 kDa subunit

CG3683

4

2R;60D13

FBgn0035046

Dpse\CG3683

4

3

agEG19249

3

2L;26B

NUKM

20 kDa subunit

CG9172

1

X; 14A5

FBgn0030718

Dpse\CG9172

1

ND

agEG16939

1

X;4A

NUIM

23 kDa subunit

ND23

3

3R;89A5

FBgn0017567

Dpse\CG3944

3

2

agEG9698

2

2R;9A

NUHM

24 kDa subunit

CG5703

3

X; 16B10

FBgn0030853

Dpse\CG5703

3

XL

agEG16953

5

2R;11A

NUGM

30 kDa subunit

CG12079

3

3L;63B7

FBgn0035404

Dpse\CG12079

3

XR

agEG11610

3

2L;24D

NUEM

39 kDa subunit

CG6020

4

3L;77C6

FBgn0037001

Dpse\CG6020

4

XR

agEG18760

3

3L;40A

NUDM

42 kDa subunit

ND42

2

3R;94A1

FBgn0019957

Dpse\CG6343

2

2

agEG10090

2

3L;41C

NUCM

49 kDa subunit

CG1970

6

4;102C2

FBgn0039909

Dpse\CG1970

6

ND

agEG18856

1

X;1B

NUBM

51 kDa subunit

CG9140

4

2L;26B6-7

FBgn0031771

Dpse\CG9140

4

4

agEG9927

4

3R;36D

NUAM

75 kDa subunit

ND75

5

X;7E1

FBgn0017566

Dpse\CG2286

5

XL

agEG19681

4

2R;8D

NI8M

B8 subunit

CG15434

3

2L;24F3

FBgn0040705

Dpse\CG15434

3

4

agEG16251

3

2R;15B

NB2M

B12 subunit

CG10320

2

2R;57F6

FBgn0034645

Dpse\CG10320

2

3

agEG9277

1

3L;46D

NB4M

B14 subunit

CG7712

3

2R;47C6

FBgn0033570

Dpse\CG7712

3

3

agEG12033

2

2R;15A

N4AM

B14.5A subunit

CG3621

2

X; 2D6-E1

FBgn0025839

Dpse\CG3621

2

XL

agEG14707

4

2R;17A

N4BM

B14.5B subunit

CG12400

3

2L:23D3

FBgn0031505

Dpse\CG12400

3

4

agEG16232

3

2R;13C

NB5M

B15 subunit

CG12859

2

2R;51C2

FBgn0033961

Dpse\CG12859

2

3

agEG17759

2

3L;44C

NB6M

B16.6 subunit

CG3446

2

X;5F2

FBgn0029868

Dpse\CG3446

2

XL

agEG7829

3

3R;35A

NB7M

B17 subunit

l(2)35Di

3

2L;35D

FBgn0001989

Dpse\CG13240

3

4

agEG18567

3

3R;34D

N7BM

B17.2 subunit

CG3214

4

2L;23A1

FBgn0031436

Dpse\CG3214

4

4

agEG10758

4

3R;31A

NB8M

B18 subunit

CG5548

1

X;13A8

FBgn0030605

Dpse\CG5548

1

XL

agEG8436

3

2L;28C

NI2M

B22 subunit

CG9306

3

2L;34B8

FBgn0032511

Dpse\CG9306

3

4

agEG12344

3

3R;35C-D

ACPM

Acyl carrier

mtacp1

4

3L;61F6

FBgn0011361

Dpse\CG9190

4

XR

agEG11237

5

3L;38B

NIAM

ASHI subunit

CG3192

3

X;6C5

FBgn0029888

Dpse\CG3192

3

XL

agEG8821

3

2R;10A

NUML

MLRQ subunit

CG32230

3

3L;80E2

FBgn0052230

Dpse\CG32230

3

XR

agEG12063

3

2R;15A

NINM

MNLL subunit

CG18624

1

X;7C

FBgn0029971

Dpse\CG18624

1

XL

agEG22692

1

X;5A

NIDM

PDSW subunit

Pdsw

3

2L;23F3

FBgn0021967

Dpse\CG8844

3

4

agEG7887

4

3R;29A

NISM

SGDH subunit

l(3)neo18

4

3L;68F5

FBgn0011455

Dpse\CG9762

4

XR

agEG13573

2

2L;27D

NIGM

AGGG subunit

CG40002

3

ND

FBgn0058002

Dpse\CG40002

3

XR

agEG18653

2R;12D

Complex II: Succinate dehydrogenase

DHSA

Flavoprotein subunit

Scs-fp

4

2R;56D3

FBgn0017539

Dpse\CG17246

4

3

agEG7754

3

3L;38B

DHSB

Iron-sulfur protein

SdhB

3

2R;42D3-4

FBgn0014028

Dpse\CG3283

3

3

agEG13539

4

2L;27D

C560

Cytochrome B560 subunit

CG6666

2

3R;86D7-8

FBgn0037873

Dpse\CG6666

2

2

agEG14929

2

3L;39B

DHSD

Cytochrome b small subunit

CG10219

4

3R;95B1

Fbgn0039112

Dpse\CG10219

4

XR

agEG16772

3

X;1C

Complex III: Ubiquinol-cytochrome c reductase

UCRY

6.4 kDa protein

CG14482

2

2R;54C9

FBgn0034245

Dpse\CG14482

2

3

agEG12505

2

3L;43B

UCRX

7.2 kDa protein

ox

2

2R;49C2

FBgn0011227

Dpse\CG8764

2

3

agEG15210

2

2L;20C

UCRH

11 kDa protein

Ucrh

2

3R

FBgn0066066

Dpse\Ucrh

2

2

agEG19398

2

2R;11B

UCR6

14 kDa protein

CG3560

3

X;14B10

FBgn0030733

Dpse\CG3560

3

XL

agEG11611

3

3L;46A

UCRI

Iron-sulfur subunit

RFeSP

3

2L;22A3

FBgn0021906

Dpse\CG7361

3

4

agEG16975

4

3R;32C

CY1

Cytochrome c1, heme protein

CG4769

6

3L;64C13

FBgn0035600

Dpse\CG4769

6

XR

agEG19223

4

2L;26C

UCR1

Core protein 1

CG3731

6

3R;88D6

FBgn0038271

Dpse\CG3731

6

2

agEG21302

3

X;5C

UCR2

Core protein 2

CG4169

4

3L;73A10

FBgn0036642

Dpse\CG4169_1

4

XR

agEG17930

4

2L;24A

UCRQ

Ubiquinone-binding protein QP-

CG7580

2

3L;74C3

FBgn0036728

Dpse\CG7580

2

XR

agEG20223

2

3L;38C

Complex IV: Cytochrome c oxidase

CX41

Polypeptide IV

CG10664

2

2L;38A8

FBgn0032833

Dpse\CG10664

2

4

agEG13327

2

3R;31C

COXA

Polypeptide Va

CoVa

1

3R;86F9

FBgn0019624

Dpse\CG14724

1

2

agEG19581

1

3L;41D

COXB

Polypeptide Vb

CG11015

3

2L;26E3

FBgn0031830

Dpse\CG11015

3

4

agEG8633

4

3R;31C

COXD

Polypeptide VIa

CG17280

2

2R;59E3

FBgn0034877

Dpse\CG17280

2

3

agEG7821

2

X;5A

COXG

Polypeptide VIb

CG18809

1

X;18E5

FBgn0042132

Dpse\CG18809

1

XL

agEG11043

1

2L;25A

COXH

Polypeptide VIc

cype

2

2L;25D6

FBgn0015031

Dpse\CG14028

2

4

EST357342

2

3R;29A

COXK

Polypeptide VIIa

CG9603

2

3R;84F13

FBgn0040529

Dpse\CG9603

2

XR

agEG17423

3

X;4B

COXO

Polypeptide VIIc

CG2249

2

2R;46D8-9

FBgn0040773

Dpse\CG2249

2

3

agEG22887

2

2L;28C

Complex V: ATP synthase

ATPA

Alpha chain

blw

4

2R;59B1-2

FBgn0011211

Dpse\CG3612

4

3

agEG7500

4

2L;21E

ATPB

Beta chain

ATPsyn-beta

3

4;102D1

FBgn0010217

Dpse\CG11154

3

ND

agEG14379

1

3L;45C

ATPG

Gamma chain

ATPsyn-gamma

1

3R;99B10

FBgn0020235

Dpse\CG7610

1

2

agEG7678

2

3R;29C

ATPD

Delta chain

CG2968

3

X;9B4

FBgn0030184

Dpse\CG2968

3

ND

agEG16076

1

3R;29B

ATPE

Epsilon chain

sun

4

X;13F12

FBgn0014391

Dpse\CG9032

4

ND

agEG10095

4

X;3D

ATPF

B chain

ATPsyn-b

3

3L;67C5

FBgn0019644

Dpse\CG8189

3

XR

agEG9580

3

2R;7A

ATPQ

D chain

ATPsyn-d

1

3R;91F

FBgn0016120

Dpse\CG6030

1

ND

agEG10180

3

3L;41C

ATPJ

E chain

CG3321

1

3R;88B4

FBgn0038224

Dpse\CG3321

1

2

agEG10809

3

2L;26B

ATPK

F chain

CG4692

2

2R;60D8-9

FBgn0035032

Dpse\CG4692

2

3

agEG1544

1

ND

ATPN

G chain

l(2)06225

2

2L;32C1

FBgn0010612

Dpse\CG6105

2

ND

agEG8590

2

3R;34B

ATPR

Coupling factor 6

ATPsyn-Cf6

2

3R;94E13

FBgn0016119

Dpse\CG4412

2

2

agEG19097

2

2R;19D

AT91

Lipid-binding protein P1

CG1746

3

3R;100B7

FBgn0039830

Dpse\CG1746

3

2

agEG14837

3

X;2B

ATPO

OSCP

Oscp

3

3R;88E8-9

FBgn0016691

Dpse\CG4307

3

2

agEG9393

3

2R;15D

Others

ATPW

ATP synthase coupling factor B

CG10731

1

2R;52F

FBgn0034081

Dpse\CG10731

1

3

agEG15185

1

2R;19B

CI30

Complex I intermediate- associate protein 30

CG7598

2

3R;99B9

FBgn0039689

Dpse\CG7598

2

2

agEG7818

2

X;5A

CYC

Cytochrome C

Cyt-c-p

1

2L;36A11

FBgn0000409

Dpse\CG17903

1

4

agEG17602

1

3R;34C

COXZ

Complex IV assembly protein COX11

CG6922

1

2L;25E5

FBgn0031712

Dpse\CG6922

1

4

agEG19985

2

3L;38B

COXS

Complex IV copper chaperone

CG9065

2

X;13A9

FBgn0030610

Dpse\CG9065_1

2

XL

agEG23169

1

3L;44C

OXA1

Biogenesis protein OXA1

CG6404

3

3L;67F1

FBgn0027615

Dpse\CG6404

3

XR

agEG11581

3

2L;22C

ETFA

Electron transfer flavoprotein alpha subunit

wal

3

2R;48C1-2

FBgn0010516

Dpse\CG8996

3

3

agEG11798

2

2R;17B

ETFB

Electron transfer flavoprotein beta subunit

CG7834

2

3R;99C1

FBgn0039697

Dpse\CG7834

2

2

agEG13614

2

2R;19D

ETFD

Electron transfer flavoprotein- ubiquinone oxidoreductase

CG12140

5

2R;46C4

FBgn0033465

Dpse\CG12140

5

3

agEG10998

4

2L;23B

COXX

Protoheme IX farnesyltransferase

CG5037

4

2L;31D9

FBgn0032222

Dpse\CG5037

3

ND

agEG11452

4

3R;32B

SCO1

Sco1 protein homolog

CG8885

2

2L;25B5

FBgn0031656

Dpse\CG8885

2

4

agEG10475

1

3R;31C

SUR1

Surfeit locus protein 1

Surf1

4

3L65D4

FBgn0029117

Dpse\CG9943

4

XR

agEG8998

4

2L;25C


*IDs in this column are taken from Swiss-Prot [20]. Only coding exons were considered. ND, map position not determined. D. melanogaster, D. pseudoobscura and A. gambiae sequences used to determine intron-exon gene structures are available as supplementary material at the MitoComp website [22]

Tripoli et al. Genome Biology 2005 6:R11   doi:10.1186/gb-2005-6-2-r11

Open Data