Table 1 |
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|
Number of exons and chromosomal localization of the 78 orthologous D. melanogaster, D pseudoobscura and A. gambiae OXPHOS genes |
|||||||||||
|
Cluster ID* |
Protein name |
D. melanogaster gene name |
Number of exons† |
Map position |
FlyBase ID |
D. pseudoobscura gene name |
Number of exons† |
Map position |
A. gambiae gene name |
Number of exons† |
Map position |
|
|
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|
Complex I: NADH:ubiquinone oxidoreductase |
|||||||||||
|
NUMM |
13 kDa A subunit |
CG8680 |
3 |
2L;25C6 |
FBgn0031684 |
Dpse\CG8680 |
3 |
4 |
agEG14117 |
3 |
3R;33B |
|
NUFM |
13 kDa B subunit |
CG6463 |
3 |
3L;67E7 |
FBgn0036100 |
Dpse\CG6463 |
3 |
XR |
agEG15380 |
3 |
2L22E |
|
NIPM |
15 kDa subunit |
CG11455 |
2 |
2L;21B1-2 |
FBgn0031228 |
Dpse\CG11455 |
2 |
4 |
agEG13302 |
2 |
3R;35C-D |
|
NUYM |
18 kDa subunit |
CG12203 |
3 |
X;18C7 |
FBgn0031021 |
Dpse\CG12203 |
3 |
XL |
agEG18985 |
4 |
2L;27A |
|
NUPM |
19 kDa subunit |
CG3683 |
4 |
2R;60D13 |
FBgn0035046 |
Dpse\CG3683 |
4 |
3 |
agEG19249 |
3 |
2L;26B |
|
NUKM |
20 kDa subunit |
CG9172 |
1 |
X; 14A5 |
FBgn0030718 |
Dpse\CG9172 |
1 |
ND |
agEG16939 |
1 |
X;4A |
|
NUIM |
23 kDa subunit |
ND23 |
3 |
3R;89A5 |
FBgn0017567 |
Dpse\CG3944 |
3 |
2 |
agEG9698 |
2 |
2R;9A |
|
NUHM |
24 kDa subunit |
CG5703 |
3 |
X; 16B10 |
FBgn0030853 |
Dpse\CG5703 |
3 |
XL |
agEG16953 |
5 |
2R;11A |
|
NUGM |
30 kDa subunit |
CG12079 |
3 |
3L;63B7 |
FBgn0035404 |
Dpse\CG12079 |
3 |
XR |
agEG11610 |
3 |
2L;24D |
|
NUEM |
39 kDa subunit |
CG6020 |
4 |
3L;77C6 |
FBgn0037001 |
Dpse\CG6020 |
4 |
XR |
agEG18760 |
3 |
3L;40A |
|
NUDM |
42 kDa subunit |
ND42 |
2 |
3R;94A1 |
FBgn0019957 |
Dpse\CG6343 |
2 |
2 |
agEG10090 |
2 |
3L;41C |
|
NUCM |
49 kDa subunit |
CG1970 |
6 |
4;102C2 |
FBgn0039909 |
Dpse\CG1970 |
6 |
ND |
agEG18856 |
1 |
X;1B |
|
NUBM |
51 kDa subunit |
CG9140 |
4 |
2L;26B6-7 |
FBgn0031771 |
Dpse\CG9140 |
4 |
4 |
agEG9927 |
4 |
3R;36D |
|
NUAM |
75 kDa subunit |
ND75 |
5 |
X;7E1 |
FBgn0017566 |
Dpse\CG2286 |
5 |
XL |
agEG19681 |
4 |
2R;8D |
|
NI8M |
B8 subunit |
CG15434 |
3 |
2L;24F3 |
FBgn0040705 |
Dpse\CG15434 |
3 |
4 |
agEG16251 |
3 |
2R;15B |
|
NB2M |
B12 subunit |
CG10320 |
2 |
2R;57F6 |
FBgn0034645 |
Dpse\CG10320 |
2 |
3 |
agEG9277 |
1 |
3L;46D |
|
NB4M |
B14 subunit |
CG7712 |
3 |
2R;47C6 |
FBgn0033570 |
Dpse\CG7712 |
3 |
3 |
agEG12033 |
2 |
2R;15A |
|
N4AM |
B14.5A subunit |
CG3621 |
2 |
X; 2D6-E1 |
FBgn0025839 |
Dpse\CG3621 |
2 |
XL |
agEG14707 |
4 |
2R;17A |
|
N4BM |
B14.5B subunit |
CG12400 |
3 |
2L:23D3 |
FBgn0031505 |
Dpse\CG12400 |
3 |
4 |
agEG16232 |
3 |
2R;13C |
|
NB5M |
B15 subunit |
CG12859 |
2 |
2R;51C2 |
FBgn0033961 |
Dpse\CG12859 |
2 |
3 |
agEG17759 |
2 |
3L;44C |
|
NB6M |
B16.6 subunit |
CG3446 |
2 |
X;5F2 |
FBgn0029868 |
Dpse\CG3446 |
2 |
XL |
agEG7829 |
3 |
3R;35A |
|
NB7M |
B17 subunit |
l(2)35Di |
3 |
2L;35D |
FBgn0001989 |
Dpse\CG13240 |
3 |
4 |
agEG18567 |
3 |
3R;34D |
|
N7BM |
B17.2 subunit |
CG3214 |
4 |
2L;23A1 |
FBgn0031436 |
Dpse\CG3214 |
4 |
4 |
agEG10758 |
4 |
3R;31A |
|
NB8M |
B18 subunit |
CG5548 |
1 |
X;13A8 |
FBgn0030605 |
Dpse\CG5548 |
1 |
XL |
agEG8436 |
3 |
2L;28C |
|
NI2M |
B22 subunit |
CG9306 |
3 |
2L;34B8 |
FBgn0032511 |
Dpse\CG9306 |
3 |
4 |
agEG12344 |
3 |
3R;35C-D |
|
ACPM |
Acyl carrier |
mtacp1 |
4 |
3L;61F6 |
FBgn0011361 |
Dpse\CG9190 |
4 |
XR |
agEG11237 |
5 |
3L;38B |
|
NIAM |
ASHI subunit |
CG3192 |
3 |
X;6C5 |
FBgn0029888 |
Dpse\CG3192 |
3 |
XL |
agEG8821 |
3 |
2R;10A |
|
NUML |
MLRQ subunit |
CG32230 |
3 |
3L;80E2 |
FBgn0052230 |
Dpse\CG32230 |
3 |
XR |
agEG12063 |
3 |
2R;15A |
|
NINM |
MNLL subunit |
CG18624 |
1 |
X;7C |
FBgn0029971 |
Dpse\CG18624 |
1 |
XL |
agEG22692 |
1 |
X;5A |
|
NIDM |
PDSW subunit |
Pdsw |
3 |
2L;23F3 |
FBgn0021967 |
Dpse\CG8844 |
3 |
4 |
agEG7887 |
4 |
3R;29A |
|
NISM |
SGDH subunit |
l(3)neo18 |
4 |
3L;68F5 |
FBgn0011455 |
Dpse\CG9762 |
4 |
XR |
agEG13573 |
2 |
2L;27D |
|
NIGM |
AGGG subunit |
CG40002 |
3 |
ND |
FBgn0058002 |
Dpse\CG40002 |
3 |
XR |
agEG18653 |
2R;12D |
|
|
Complex II: Succinate dehydrogenase |
|||||||||||
|
DHSA |
Flavoprotein subunit |
Scs-fp |
4 |
2R;56D3 |
FBgn0017539 |
Dpse\CG17246 |
4 |
3 |
agEG7754 |
3 |
3L;38B |
|
DHSB |
Iron-sulfur protein |
SdhB |
3 |
2R;42D3-4 |
FBgn0014028 |
Dpse\CG3283 |
3 |
3 |
agEG13539 |
4 |
2L;27D |
|
C560 |
Cytochrome B560 subunit |
CG6666 |
2 |
3R;86D7-8 |
FBgn0037873 |
Dpse\CG6666 |
2 |
2 |
agEG14929 |
2 |
3L;39B |
|
DHSD |
Cytochrome b small subunit |
CG10219 |
4 |
3R;95B1 |
Fbgn0039112 |
Dpse\CG10219 |
4 |
XR |
agEG16772 |
3 |
X;1C |
|
Complex III: Ubiquinol-cytochrome c reductase |
|||||||||||
|
UCRY |
6.4 kDa protein |
CG14482 |
2 |
2R;54C9 |
FBgn0034245 |
Dpse\CG14482 |
2 |
3 |
agEG12505 |
2 |
3L;43B |
|
UCRX |
7.2 kDa protein |
ox |
2 |
2R;49C2 |
FBgn0011227 |
Dpse\CG8764 |
2 |
3 |
agEG15210 |
2 |
2L;20C |
|
UCRH |
11 kDa protein |
Ucrh |
2 |
3R |
FBgn0066066 |
Dpse\Ucrh |
2 |
2 |
agEG19398 |
2 |
2R;11B |
|
UCR6 |
14 kDa protein |
CG3560 |
3 |
X;14B10 |
FBgn0030733 |
Dpse\CG3560 |
3 |
XL |
agEG11611 |
3 |
3L;46A |
|
UCRI |
Iron-sulfur subunit |
RFeSP |
3 |
2L;22A3 |
FBgn0021906 |
Dpse\CG7361 |
3 |
4 |
agEG16975 |
4 |
3R;32C |
|
CY1 |
Cytochrome c1, heme protein |
CG4769 |
6 |
3L;64C13 |
FBgn0035600 |
Dpse\CG4769 |
6 |
XR |
agEG19223 |
4 |
2L;26C |
|
UCR1 |
Core protein 1 |
CG3731 |
6 |
3R;88D6 |
FBgn0038271 |
Dpse\CG3731 |
6 |
2 |
agEG21302 |
3 |
X;5C |
|
UCR2 |
Core protein 2 |
CG4169 |
4 |
3L;73A10 |
FBgn0036642 |
Dpse\CG4169_1 |
4 |
XR |
agEG17930 |
4 |
2L;24A |
|
UCRQ |
Ubiquinone-binding protein QP- |
CG7580 |
2 |
3L;74C3 |
FBgn0036728 |
Dpse\CG7580 |
2 |
XR |
agEG20223 |
2 |
3L;38C |
|
Complex IV: Cytochrome c oxidase |
|||||||||||
|
CX41 |
Polypeptide IV |
CG10664 |
2 |
2L;38A8 |
FBgn0032833 |
Dpse\CG10664 |
2 |
4 |
agEG13327 |
2 |
3R;31C |
|
COXA |
Polypeptide Va |
CoVa |
1 |
3R;86F9 |
FBgn0019624 |
Dpse\CG14724 |
1 |
2 |
agEG19581 |
1 |
3L;41D |
|
COXB |
Polypeptide Vb |
CG11015 |
3 |
2L;26E3 |
FBgn0031830 |
Dpse\CG11015 |
3 |
4 |
agEG8633 |
4 |
3R;31C |
|
COXD |
Polypeptide VIa |
CG17280 |
2 |
2R;59E3 |
FBgn0034877 |
Dpse\CG17280 |
2 |
3 |
agEG7821 |
2 |
X;5A |
|
COXG |
Polypeptide VIb |
CG18809 |
1 |
X;18E5 |
FBgn0042132 |
Dpse\CG18809 |
1 |
XL |
agEG11043 |
1 |
2L;25A |
|
COXH |
Polypeptide VIc |
cype |
2 |
2L;25D6 |
FBgn0015031 |
Dpse\CG14028 |
2 |
4 |
EST357342 |
2 |
3R;29A |
|
COXK |
Polypeptide VIIa |
CG9603 |
2 |
3R;84F13 |
FBgn0040529 |
Dpse\CG9603 |
2 |
XR |
agEG17423 |
3 |
X;4B |
|
COXO |
Polypeptide VIIc |
CG2249 |
2 |
2R;46D8-9 |
FBgn0040773 |
Dpse\CG2249 |
2 |
3 |
agEG22887 |
2 |
2L;28C |
|
Complex V: ATP synthase |
|||||||||||
|
ATPA |
Alpha chain |
blw |
4 |
2R;59B1-2 |
FBgn0011211 |
Dpse\CG3612 |
4 |
3 |
agEG7500 |
4 |
2L;21E |
|
ATPB |
Beta chain |
ATPsyn-beta |
3 |
4;102D1 |
FBgn0010217 |
Dpse\CG11154 |
3 |
ND |
agEG14379 |
1 |
3L;45C |
|
ATPG |
Gamma chain |
ATPsyn-gamma |
1 |
3R;99B10 |
FBgn0020235 |
Dpse\CG7610 |
1 |
2 |
agEG7678 |
2 |
3R;29C |
|
ATPD |
Delta chain |
CG2968 |
3 |
X;9B4 |
FBgn0030184 |
Dpse\CG2968 |
3 |
ND |
agEG16076 |
1 |
3R;29B |
|
ATPE |
Epsilon chain |
sun |
4 |
X;13F12 |
FBgn0014391 |
Dpse\CG9032 |
4 |
ND |
agEG10095 |
4 |
X;3D |
|
ATPF |
B chain |
ATPsyn-b |
3 |
3L;67C5 |
FBgn0019644 |
Dpse\CG8189 |
3 |
XR |
agEG9580 |
3 |
2R;7A |
|
ATPQ |
D chain |
ATPsyn-d |
1 |
3R;91F |
FBgn0016120 |
Dpse\CG6030 |
1 |
ND |
agEG10180 |
3 |
3L;41C |
|
ATPJ |
E chain |
CG3321 |
1 |
3R;88B4 |
FBgn0038224 |
Dpse\CG3321 |
1 |
2 |
agEG10809 |
3 |
2L;26B |
|
ATPK |
F chain |
CG4692 |
2 |
2R;60D8-9 |
FBgn0035032 |
Dpse\CG4692 |
2 |
3 |
agEG1544 |
1 |
ND |
|
ATPN |
G chain |
l(2)06225 |
2 |
2L;32C1 |
FBgn0010612 |
Dpse\CG6105 |
2 |
ND |
agEG8590 |
2 |
3R;34B |
|
ATPR |
Coupling factor 6 |
ATPsyn-Cf6 |
2 |
3R;94E13 |
FBgn0016119 |
Dpse\CG4412 |
2 |
2 |
agEG19097 |
2 |
2R;19D |
|
AT91 |
Lipid-binding protein P1 |
CG1746 |
3 |
3R;100B7 |
FBgn0039830 |
Dpse\CG1746 |
3 |
2 |
agEG14837 |
3 |
X;2B |
|
ATPO |
OSCP |
Oscp |
3 |
3R;88E8-9 |
FBgn0016691 |
Dpse\CG4307 |
3 |
2 |
agEG9393 |
3 |
2R;15D |
|
Others |
|||||||||||
|
ATPW |
ATP synthase coupling factor B |
CG10731 |
1 |
2R;52F |
FBgn0034081 |
Dpse\CG10731 |
1 |
3 |
agEG15185 |
1 |
2R;19B |
|
CI30 |
Complex I intermediate- associate protein 30 |
CG7598 |
2 |
3R;99B9 |
FBgn0039689 |
Dpse\CG7598 |
2 |
2 |
agEG7818 |
2 |
X;5A |
|
CYC |
Cytochrome C |
Cyt-c-p |
1 |
2L;36A11 |
FBgn0000409 |
Dpse\CG17903 |
1 |
4 |
agEG17602 |
1 |
3R;34C |
|
COXZ |
Complex IV assembly protein COX11 |
CG6922 |
1 |
2L;25E5 |
FBgn0031712 |
Dpse\CG6922 |
1 |
4 |
agEG19985 |
2 |
3L;38B |
|
COXS |
Complex IV copper chaperone |
CG9065 |
2 |
X;13A9 |
FBgn0030610 |
Dpse\CG9065_1 |
2 |
XL |
agEG23169 |
1 |
3L;44C |
|
OXA1 |
Biogenesis protein OXA1 |
CG6404 |
3 |
3L;67F1 |
FBgn0027615 |
Dpse\CG6404 |
3 |
XR |
agEG11581 |
3 |
2L;22C |
|
ETFA |
Electron transfer flavoprotein alpha subunit |
wal |
3 |
2R;48C1-2 |
FBgn0010516 |
Dpse\CG8996 |
3 |
3 |
agEG11798 |
2 |
2R;17B |
|
ETFB |
Electron transfer flavoprotein beta subunit |
CG7834 |
2 |
3R;99C1 |
FBgn0039697 |
Dpse\CG7834 |
2 |
2 |
agEG13614 |
2 |
2R;19D |
|
ETFD |
Electron transfer flavoprotein- ubiquinone oxidoreductase |
CG12140 |
5 |
2R;46C4 |
FBgn0033465 |
Dpse\CG12140 |
5 |
3 |
agEG10998 |
4 |
2L;23B |
|
COXX |
Protoheme IX farnesyltransferase |
CG5037 |
4 |
2L;31D9 |
FBgn0032222 |
Dpse\CG5037 |
3 |
ND |
agEG11452 |
4 |
3R;32B |
|
SCO1 |
Sco1 protein homolog |
CG8885 |
2 |
2L;25B5 |
FBgn0031656 |
Dpse\CG8885 |
2 |
4 |
agEG10475 |
1 |
3R;31C |
|
SUR1 |
Surfeit locus protein 1 |
Surf1 |
4 |
3L65D4 |
FBgn0029117 |
Dpse\CG9943 |
4 |
XR |
agEG8998 |
4 |
2L;25C |
|
|
|||||||||||
|
*IDs in this column are taken from Swiss-Prot [20]. †Only coding exons were considered. ND, map position not determined. D. melanogaster, D. pseudoobscura and A. gambiae sequences used to determine intron-exon gene structures are available as supplementary material at the MitoComp website [22] |
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|
Tripoli et al. Genome Biology 2005 6:R11 doi:10.1186/gb-2005-6-2-r11 |
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