Table 3 |
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|
DNA-repair genes missing only in P. marinus MED4 or in both MED4 and SS120 |
||||||
|
Gene |
COG |
Product |
MED4 |
SS120 |
MIT9313 |
WH8102 |
|
|
||||||
|
ada/ogt |
0350 |
6-O-methylguanine-DNA methyltransferase |
- |
- |
PMT0269 |
SYNW1680 |
|
mutY |
1194 |
A/G-specific DNA glycosylase |
- |
Pro1789 |
PMT0135 |
SYNW0115 |
|
recQ |
0514 |
Superfamily II DNA helicase |
- |
- |
PMT0189 |
SYNW1958 |
|
recJ |
0608 |
Single-stranded DNA-specific exonuclease |
- |
Pro0984 |
PMT0761 |
SYNW1206 |
|
exoI/xseA |
1570 |
Exonuclease VII large subunit |
- |
Pro0111 |
PMT1641 |
SYNW2181 |
|
xseB |
1722 |
Exonuclease VII small subunit |
- |
Pro0112 |
PMT1642 |
SYNW2182 |
|
- |
0494 |
NUDIX hydrolase family |
- |
- |
PMT1026 |
SYNW1334 |
|
|
||||||
|
Genes in bold are involved in repair of G:C to A:T mutations. |
||||||
|
Dufresne et al. Genome Biology 2005 6:R14 doi:10.1186/gb-2005-6-2-r14 |
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