Table 1

Northern blot validation of differential gene expression

Probe set ID

Accession number

Gene

Fold change

Probe pairs increasing

Differential expression confirmed


99067_at

X59846

Gas6

3.41

16/16

x

100064_f_at

M63801

Gja1

1.67

12/16

x

102016_at

M61737

Fsp27

2.07

11/16

x

93996_at

X01026

Cyp2e1

11.6

10/16

x

97507_at

X67809

Ppicap

2.85

9/16

x

101995_at

U40930

Sqstm1

1.48

8/16

x

93096_at

AA986050

3010002H13Rik

2.65

7/16

x

102791_at

U22033

Psmb8

1.65

7/16

x

96072_at

M17516

Ldh1

1.37

6/16


Genes identified as being differentially expressed were randomly chosen for verification by northern blot hybridization (see text for description). Gene identifiers are shown along with fold changes, numbers of probe pairs increasing (as identified by ChipStat with pps = 0.04), and confirmation of differential expression.

Master et al. Genome Biology 2005 6:R20   doi:10.1186/gb-2005-6-2-r20

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