Research
Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana
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* Corresponding author: Nam-Hai Chua chua@mail.rockefeller.edu
1 Laboratory of Computational Genomics, The Rockefeller University, New York, NY 10021, USA
2 Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
3 Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92093, USA
4 Laboratory of Plant Molecular Biology, The Rockefeller University, New York, NY 10021, USA
Genome Biology 2005, 6:R30 doi:10.1186/gb-2005-6-4-r30
Published: 15 March 2005Additional files
Additional File 1:
Classes of overlap patterns: 1. tail to tail (3' end overlap); 2. head to head (5' end overlap); 3. one transcript is contained entirely within the other transcript; 4.two transcripts overlap only within introns. Coding potential of a transcript: '+' with coding potential; '- ' without coding potential
Format: XLS Size: 316KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional File 2:
Classes of overlap patterns: 1. tail to tail (3' end overlap); 2. head to head (5' end overlap); 3. one transcript is contained entirely within the other transcript; 4.two transcripts overlap only within introns. Coding potential of a transcript: '+' with coding potential; '- ' without coding potential
Format: XLS Size: 142KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional File 3:
Classes of overlap patterns: 1. tail to tail (3' end overlap); 2. head to head (5' end overlap); 3. one transcript is contained entirely within the other transcript; 4.two transcripts overlap only within introns. Coding potential of a transcript: '+' with coding potential; '- ' without coding potential
Format: XLS Size: 81KB Download file
This file can be viewed with: Microsoft Excel Viewer