  ResearchGenome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thalianaXiu-Jie Wang1,2 1Laboratory of Computational Genomics, The Rockefeller University, New York, NY 10021, USA 2Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China 3Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92093, USA 4Laboratory of Plant Molecular Biology, The Rockefeller University, New York, NY 10021, USA
Genome Biology 2005, 6:R30doi:10.1186/gb-2005-6-4-r30
Subject areas: Bioinformatics, Genetics, Plant biology Additional filesAdditional File 1: Classes of overlap patterns: 1. tail to tail (3' end overlap); 2. head to head (5' end overlap); 3. one transcript is contained entirely within the other transcript; 4.two transcripts overlap only within introns. Coding potential of a transcript: '+' with coding potential; '- ' without coding potential Format: XLS Size: 316KB Download file This file can be viewed with: Microsoft Excel Viewer Additional File 2: Classes of overlap patterns: 1. tail to tail (3' end overlap); 2. head to head (5' end overlap); 3. one transcript is contained entirely within the other transcript; 4.two transcripts overlap only within introns. Coding potential of a transcript: '+' with coding potential; '- ' without coding potential Format: XLS Size: 142KB Download file This file can be viewed with: Microsoft Excel Viewer Additional File 3: Classes of overlap patterns: 1. tail to tail (3' end overlap); 2. head to head (5' end overlap); 3. one transcript is contained entirely within the other transcript; 4.two transcripts overlap only within introns. Coding potential of a transcript: '+' with coding potential; '- ' without coding potential Format: XLS Size: 81KB Download file This file can be viewed with: Microsoft Excel Viewer |
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