Table 7

The combined numbers of polymorphisms and the mutation rates in the promoters, ORFs and exons of seven genes showing high variation in expression

Accession ID/polymophisms

Description

Promoter

ORF

Exon

Promoter

ORF

Exon


Five accessions

All accessions


At1g28210

Mitochondrial protein (AtJ1), putative

33

23

4

43

32

4

At2g32930

CCCH Zn-finger protein

1

2

0

1

3

1

At2g34290

Putative protein kinase

1

11

11

10

21

21

At3g13445

Transcription initiation factor TFIID-1 (TATA sequence-binding protein 1)

7

2

0

9

3

3

At4g10160

Putative RING Zn-finger protein

7

46

15

16

57

20

At4g39410

WRKY family transcription factor

3

12

0

6

12

6

At2g18790

Phytochrome B (PHYB) photoreceptor

9

10

7

21

82

71

Total number

61

106

37

106

210

126

Rate per kb

8.06

6.11

4.08

14.00

12.10

13.90


Chen et al. Genome Biology 2005 6:R32   doi:10.1186/gb-2005-6-4-r32

Open Data