Table 3

Thiol-dependent redox selenoproteins detected in the Sargasso Sea database and their predicted redox motifs containing Sec (U)

Selenoprotein family

Redox motif

Individual sequences


Known redox proteins

Peroxiredoxin

TXXU

43

Proline reductase PrdB

UXXC

42

Prx-like protein

UXXC

21

UXC

1

Thioredoxin

UXXC

11

Glutathione peroxidase

UXXT

5

AhpD-like protein

CXXU

27

Arsenate reductase

UXXS

14

Glutaredoxin

UXXC

10

DsbA-like protein

UXXC

9

Thiol-disulfide isomerase-like protein

UXXC

4

OsmC-like protein

UXXT

3

DsrE-like protein

UXXC

2

DsbG-like protein

UXXC

1

NADH:ubiquinone oxidoreductase

TXXU

1

Candidate redox proteins

SelW-like protein

CXXU

48

CMD domain-containing protein

CXXU

4

Hypothetical protein 1

CXXU

4


Zhang et al. Genome Biology 2005 6:R37   doi:10.1186/gb-2005-6-4-r37

Open Data