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The initial list of the interactions and proteins represented in each of the existing human protein interaction datasets with total interactions, unique self-interactions and unique non-self interactions |
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| Dataset |
Version |
Total interactions (number of proteins) |
Unique self (A-A) interactions (number of proteins) |
Unique (A-B) interactions (number of proteins) |
|
|
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| Reactome |
08/03/04 |
12,497 (6,257) |
160 (160) |
12,336 (807) |
| BIND |
08/03/04 |
6,212 (5,412) |
549 (549) |
5,663 (4,762) |
| HPRD* |
04/12/04 |
12,013 (4,122) |
3,028 (3,028) |
6,054 (2,747) |
| Orthology transfer (all) |
03/31/04 |
71,497 (6,257) |
373 (373) |
71,124 (6,228) |
| Orthology transfer (core) |
03/31/04 |
11,488 (3,918) |
206 (206) |
11,282 (3,863) |
|
*Difficult to measure: HPRD records genes by their names, leading occasionally to entries for the same gene under different synonyms. The numbers reported are after mapping to LocusLink. | ||||
Ramani et al. Genome Biology 2005 6:R40 doi:10.1186/gb-2005-6-5-r40 |
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