Genome Biology

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Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells

Alexander S Brodsky1*, Clifford A Meyer2, Ian A Swinburne1, Giles Hall3, Benjamin J Keenan1, Xiaole S Liu2, Edward A Fox3 and Pamela A Silver1

Author Affiliations

1 Department of Systems Biology, Harvard Medical School and Department of Cancer Biology, Dana-Farber Cancer Institute, 44 Binney St, Boston, MA 02115, USA

2 Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute and Harvard School of Public Health, Boston, MA 02155, USA

3 Department of Medicine, Harvard Medical School and Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02115, USA

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Genome Biology 2005, 6:R64 doi:10.1186/gb-2005-6-8-r64

Published: 15 July 2005

Additional files

Additional File 1:

A table listing PolIIa annotated to refGene.

Format: XLS Size: 23KB Download file

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Additional File 2:

A table listing PolIIa annotated to known genes.

Format: XLS Size: 25KB Download file

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Additional File 3:

A table listing PolIIa annotated to RefSeq.

Format: XLS Size: 65KB Download file

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Additional File 4:

A table listing PolII annotated to known genes.

Format: XLS Size: 74KB Download file

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Additional File 5:

A table listing PolII annotated to genscan exons.

Format: XLS Size: 14KB Download file

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Additional File 6:

A table listing knownGene and RefSeq populations on the ENCODE array.

Format: XLS Size: 19KB Download file

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Additional File 7:

A table listing the PolIIa-defined active gene list.

Format: XLS Size: 15KB Download file

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Additional File 8:

The PCR primer list and annotation.

Format: XLS Size: 17KB Download file

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