Genome Biology

official impact factor 6.89

Open Access Research

Tandem repeat copy-number variation in protein-coding regions of human genes

Colm T O'Dushlaine, Richard J Edwards, Stephen D Park and Denis C Shields*

Author Affiliations

Bioinformatics Core, Department of Clinical Pharmacology and Institute of Biopharmaceutical Sciences, Royal College of Surgeons in Ireland, 123 St Stephen's Green, Dublin 2, Ireland

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Genome Biology 2005, 6:R69 doi:10.1186/gb-2005-6-8-r69

Published: 28 July 2005

Additional files

Additional data file 1:

295 repeat variants (spanning 218 UniGene clusters) detected in our analysis, with information on the repeats and a description of the cluster representative sequence.

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Additional data file 2:

Block lengths of repeats grouped into 249 unique repeat loci. For each locus, the heterozygosity of the repeat length allele frequencies has been calculated.

Format: XLS Size: 51KB Download file

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Additional data file 3:

Data used for Figure 3. Counts of variant and invariant repeats of different unit lengths and copy-numbers are tabulated.

Format: XLS Size: 23KB Download file

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Open Data