Genome Biology

official impact factor 6.89

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Identification of cyanobacterial non-coding RNAs by comparative genome analysis

Ilka M Axmann, Philip Kensche, Jörg Vogel, Stefan Kohl, Hanspeter Herzel and Wolfgang R Hess*

Genome Biology 2005, 6:R73 doi:10.1186/gb-2005-6-9-r73

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BioMed Central: 8 citations

Research article   Open Access Highly Accessed

Biocomputational prediction of non-coding RNAs in model cyanobacteria

Björn Voß, Jens Georg, Verena Schön, Susanne Ude, Wolfgang R Hess BMC Genomics 2009, 10:123 (23 March 2009)

New conserved non-coding RNA (ncRNAs) in four species of cyanobacteria have been validated, opening the way for a less stringent comparative analysis with experimental support to discover even more previously unidentified elements.

Research   Open Access

Computational prediction of novel non-coding RNAs in Arabidopsis thaliana

Dandan Song, Yang Yang, Bin Yu, Binglian Zheng, Zhidong Deng, Bao-Liang Lu, Xuemei Chen, Tao Jiang BMC Bioinformatics 2009, 10(Suppl 1):S36 (30 January 2009)

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Prediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011

Claudio Valverde, Jonathan Livny, Jan-Philip Schlüter, Jan Reinkensmeier, Anke Becker, Gustavo Parisi BMC Genomics 2008, 9:416 (16 September 2008)

Methodology article   Open Access

Dinucleotide controlled null models for comparative RNA gene prediction

Tanja Gesell, Stefan Washietl BMC Bioinformatics 2008, 9:248 (27 May 2008)

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Biocomputational prediction of small non-coding RNAs in Streptomyces

Josef Pánek, Jan Bobek, Karel Mikulík, Marek Basler, Jiří Vohradský BMC Genomics 2008, 9:217 (13 May 2008)

Research article   Open Access

Identification of chromosomal alpha-proteobacterial small RNAs by comparative genome analysis and detection in Sinorhizobium meliloti strain 1021

Vincent M Ulvé, Emeric W Sevin, Angélique Chéron, Frédérique Barloy-Hubler BMC Genomics 2007, 8:467 (19 December 2007)

Research article   Open Access

A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria

Björn Voß, Gregor Gierga, Ilka M Axmann, Wolfgang R Hess BMC Genomics 2007, 8:375 (17 October 2007)

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Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change

Andrew V Uzilov, Joshua M Keegan, David H Mathews BMC Bioinformatics 2006, 7:173 (27 March 2006)