Genome Biology

official impact factor 6.89

Open Access Research

Identification of cyanobacterial non-coding RNAs by comparative genome analysis

Ilka M Axmann1, Philip Kensche1,2, Jörg Vogel3, Stefan Kohl1, Hanspeter Herzel2 and Wolfgang R Hess4,1*

Author Affiliations

1 Humboldt-University, Department of Biology/Genetics, Chausseestrasse, D-Berlin, Germany

2 Humboldt-University, Institute for Theoretical Biology, Invalidenstrasse, Berlin, Germany

3 Max Planck Institute for Infection Biology, Schumannstrasse, Berlin, Germany

4 University Freiburg, Institute of Biology II/Experimental Bioinformatics, Schänzlestrasse, Freiburg, Germany

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Genome Biology 2005, 6:R73 doi:10.1186/gb-2005-6-9-r73

Published: 17 August 2005

Additional files

Additional data file 1:

Figures showing the determination of half-lifes for several ncRNAs (Figure S9) and the composition of cluster 53 (Figure S10).

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Additional data file 2:

Tables listing the genome versions used in this study and details of intergenic regions (Table S4), the parameters for the initial local alignment of intergenic spacer regions, the clustering step and ALIFOLDZ (Table S5) and the sequences of oligonucleotides used in this study (Table S3).

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