Table 1

TopNet comparison of several networks
Source
 Average degree
 Average distance
 Clustering coefficient
 Diameter
Figure 4 (NESG IDs)
 19
 2.7
 0.43
 6
Figure 4 (JCSG IDs)
 45
 1.5
 0.46
 3
Figure 4 (TB IDs)
 6.7
 2.0
 0.46
 4
Figure 5a (DNA pol IDs)
 15
 3.1
 0.44
 7
Figure 5b (RNA pol IDs)
 13
 3.1
 0.44
 7
Figure 6a (PSI IDs)
 24
 2.6
 0.37
 7
Figure 6b (PDB IDs 1)
 6.1
 3.9
 0.31
 9
Figure 6b (PDB IDs 2)
 6.7
 3.8
 0.33
 10

JCSG, Joint Center for Structural Genomics; NESG, Northeast Structural Genomics; PDB, Protein Data Bank; pol, polymerase; TB, Tuberculosis Structural Genomics.

Douglas et al. Genome Biology 2005 6:R80   doi:10.1186/gb-2005-6-9-r80

Open Data