|
Support for alternative transcription starts and stops within the phosphoregulator set |
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| End |
5 counts |
10 counts |
20 counts |
50 counts |
|
|
|
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| 5' |
5' exon clusters |
1086/612 (1.8) |
852/576 (1.5) |
730/543 (1.3) |
577/480 (1.2) |
| TSS clusters |
1289/609 (2.1) |
924/572 (1.6) |
742/533 (1.4) |
550/472 (1.2) |
|
| 3' |
3' exon clusters |
976/611 (1.6) |
750/564 (1.3) |
576/495 (1.2) |
335/307 (1.1) |
| TTS clusters |
1600/620 (2.6) |
1054/566 (1.9) |
685/483 (1.4) |
307/262 (1.2) |
|
|
Number of 5' or 3' ends are shown for thresholds of 5, 10, 20 or 50 supporting tags. Shows the number of ends divided by the number of genes, and the ratio in brackets Note that at a threshold of 50, the number of genes with 3' end support is almost half that with 5' support. TSS, transcription start site; TTS, transcription termination site. | |||||
Forrest et al. Genome Biology 2006 7:R5 doi:10.1186/gb-2006-7-1-r5 |
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