Table 1 |
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|
Fifteen repeat families containing domains shared with repeat families of different biological origin |
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| Repeat family |
Number of domains |
Length of domains |
Percent shared |
|
|
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| HARLEQUIN |
34 |
6,245 |
0.9 |
| MER52AI |
32 |
5,375 |
0.76 |
| HERVL |
4 |
5,117 |
0.9 |
| ERVL |
4 |
5,117 |
0.89 |
| HUERS-P3 |
31 |
5,106 |
0.57 |
| LOR1I |
54 |
4,034 |
0.5 |
| HUERS-P3B |
67 |
3,791 |
0.51 |
| HERVE |
9 |
3,463 |
0.44 |
| HERVG25 |
50 |
3,431 |
0.49 |
| HERV35I |
54 |
2,933 |
0.42 |
| MER51I |
45 |
2,914 |
0.37 |
| MER4I |
48 |
2,896 |
0.45 |
| HERVIP10FH |
25 |
2,782 |
0.54 |
| PABL_AI |
52 |
2,665 |
0.53 |
|
|
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The list is sorted by the total length of shared domains. See Additional data file 4 for the complete table. |
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|
Zhi et al. Genome Biology 2006 7:R7 doi:10.1186/gb-2006-7-1-r7 |
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