|
Human probes used in the study |
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| Code |
BAC |
Accession no. |
Map |
UCSC (May 2004) |
Duplicons >20 kb (kb) |
|
|
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| A1 |
RP11-631L24 |
BES |
13q11 |
18,200,927-18,369,699 |
|
| A |
RP11-110K18 |
AL137119 |
13q12.11 |
19,404,213-19,546,706 |
|
| B1 |
RP11-264J4 |
AL138688 |
13q12.11 |
19,546,607-19,674,400 |
20,660,153-20,838,143 (178 kb) |
| B |
RP11-45B20 |
AL445985 |
13q12.12 |
23,305,109-23,483,639 |
23,779,363-24,076,626 (279 kb) |
| 24,400,396-24,504,215 (104 kb) |
|||||
| C1 |
RP11-136G6 |
BES |
13q12.2 |
27,400,228-27,581,446 |
|
| C |
RP11-64I8 |
AL158065 |
13q12.3 |
30,502,889-30,571,189 |
|
| D |
RP11-142E9 |
BES |
13q13.2 |
33,252,754-33,451,136 |
34,390,618-34,605,903 (215 kb) |
| E |
RP11-145J3 |
AL137878 |
13q14.11 |
42,340,023-42,427,380 |
40,186,105-40,396,852 (210 kb) |
| 40,892,985-40,914,548 (21 kb) |
|||||
| 41,919,710-41,988,111 (68 kb) |
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| F |
RP11-30N18 |
BES |
13q14.12 |
44,481,780-44,541,540 |
|
| F1 |
RP11-661C17 |
BES |
13q14.13 |
45,660,985-45,826,015 |
|
| G2 |
RP11-939G7 |
BES |
13q14.13 |
45,754,269-45,939,953 |
45,879,285-45,940,396 (61 kb) |
| G1 |
RP11-945G11 |
BES |
13q14.13 |
45,928,366-46,127,167 |
|
| G |
RP11-103J18 |
AL138875 |
13q14.2 |
48,711,312-48,801,118 |
51,634,782-52,115,918 (481 kb) |
| H |
RP11-10O23 |
AC013618 |
13q21.1 |
55,430,662-55,603,003 |
56,611,299-56,645,585 (34 kb) |
| H1 |
RP11-543A19 |
AL590102 |
13q21.2 |
61,111,769-61,178,154 |
|
| H2 |
RP11-1043D14 |
BES |
13q21.31 |
61,282,357-61,458,258 |
|
| H3 |
RP11-539I23 |
AL354803 |
13q21.31 |
61,530,165-61,709,544 |
|
| H4 |
RP11-527N12 |
AL354810 |
13q21.31 |
62,520,878-62,699,203 |
|
| H5 |
RP11-320N6 |
AL359208 |
13q21.31 |
62,804,903-62,944,551 |
|
| H6 |
RP11-520F9 |
AL355879 |
13q21.32 |
63,407,676-63,481,486 |
63,188,927-63,316,389 (127 kb) |
| H7 |
RP11-318C5 |
AL356253 |
13q21.32 |
64,037,783-64,238,420 |
|
| H8 |
RP11-379K8 |
AL354739 |
13q21.32 |
64,786,660-64,966,449 |
|
| H9 |
RP11-612P16 |
BES |
13q21.32 |
65,079,597-65,282,688 |
|
| I |
RP11-187E23 |
AL136999 |
13q21.32 |
66,092,979-66,264,337 |
|
| NC ring |
RP11-23B16 |
AL161894 |
13q21.33 |
67,841,134-67,947,116 |
|
| NC invdup |
RP11-209P2 |
AL162212 |
13q21.33 |
70,669,808-70,794,225 |
|
| RP11-543G6 |
AL590141 |
13q21.33 |
70,794,126-70,797,735 |
||
| RP11-512J14 |
AL354995 |
13q21.33 |
70,797,636-70,947,217 |
||
| K |
RP11-188A23 |
AL354831 |
13q22.3 |
77,153,157-77,297,742 |
|
| K2 |
RP11-351H1 |
BES |
13q31.1 |
84,396,772-84,582,561 |
|
| L |
RP11-143O10 |
AL353635 |
13q31.2 |
88,642,642-88,673,975 |
|
| N |
RP11-245B11 |
AL161774 |
13q34 |
113,770,458-113,932,864 |
91,231,475-92,135,792 (894 kb) |
| tel |
114,142,980 |
111,979,464-112,007,994 (28 kb) |
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|
Probes in bold were used to characterize all primate species. Probes in italics were used to define specific rearrangements. BES, BAC ends; NC, neocentromere. | |||||
Cardone et al. Genome Biology 2006 7:R91 doi:10.1186/gb-2006-7-10-r91 |
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