|
Expression analysis of trans-NAT pairs using MPSS data |
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| No. of trans-NAT pairs |
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|
|
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| Trans-NAT groups |
Without MPSS tag |
Single strand with MPSS tag |
Both strands with MPSS tag (same tissue) |
No. of total pairs |
|
|
|
|||||
| HC |
17 nt MPSS tag |
196 |
125 |
47 (37) |
368 |
| 20 nt MPSS tag |
197 |
115 |
56 (40) |
||
| Either 17 nt or 20 nt MPSS tag |
192 |
118 |
58 (50) |
||
| 100 nt |
17 nt MPSS tag |
276 |
436 |
240 (184) |
952 |
| 20 nt MPSS tag |
269 |
428 |
255 (199) |
||
| Either 17 nt or 20 nt MPSS tag |
252 |
430 |
270 (231) |
||
|
Data in parentheses are number of trans-NAT pairs with expression in the same tissue. HC and 100-nt refer to the 'high-coverage' and the '100 nt' trans-NAT pair categories, respectively. | |||||
Wang et al. Genome Biology 2006 7:R92 doi:10.1186/gb-2006-7-10-r92 |
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