|
Over-represented gene families or functional groups in Arabidopsis trans-NAT pairs |
||||
| Rank |
N |
X |
P-adj |
GO attribute |
|
|
||||
| 1 |
43 |
167 |
<0.001 |
0008194: UDP-glycosyl transferase activity |
| 2 |
197 |
2,634 |
<0.001 |
0016757: transferase activity |
| 3 |
16 |
40 |
<0.001 |
0016168: chlorophyll binding |
| 4 |
102 |
1,158 |
<0.001 |
0005515: protein binding |
| 5 |
16 |
58 |
<0.001 |
0042546: cell wall biosynthesis |
| 6 |
10 |
25 |
<0.001 |
0030076: light-harvesting complex |
| 7 |
25 |
195 |
0.003 |
0006511: ubiquitin-dependent proteolysis |
| 8 |
42 |
437 |
0.003 |
0006464: protein modification |
| 9 |
53 |
611 |
0.003 |
0007165: signal transduction |
| 10 |
392 |
7,058 |
0.006 |
0003824: catalytic activity |
| 11 |
23 |
194 |
0.013 |
0009733: response to auxin stimulus |
|
N, number of transcripts from the same GO category involved in Arabidopsis trans-NAT pairs; P-adj, adjusted p value calculated by 1,000 null-hypothesis simulations using Fisher exact test; X, number of genes from the same GO category in Arabidopsis genome. | ||||
Wang et al. Genome Biology 2006 7:R92 doi:10.1186/gb-2006-7-10-r92 |
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