Table 1

Probe sets with altered transcriptional regulation after ethanol exposure with q < 0.001

Probe set ID
p value
Gene name
Biological process
Changes in expression

1623332_at
1.91E-05
CG31106
Transmission of nerve impulse; carbohydrate metabolism
Transient up-regulation
1623605_a_at
2.20E-05
Serpin-27A (M,H)*
Toll signaling pathway; defense response
Transient up-regulation
1624662_at
2.20E-05
CG11414
Protein ubiquitination
Acute up-regulation
1624736_a_at
2.20E-05
CG11878
Unknown
Slow up-regulation
1625193_at
2.20E-05
CG31272
Lipid metabolism; neurotransmitter secretion; transport
Slow up-regulation
1626882_at
2.35E-05
Pinocchio
Olfactory behavior;response to chemical stimulus
Transient up-regulation
1627080_at
5.07E-05
CG14893
Unknown
Slow up-regulation
1627385_at
6.86E-05
minidiscs
Amino acid transport, metabolism
Transient down-regulation
1628229_at
6.86E-05
Trypsin 29F
Proteolysis
Slow up-regulation
1628494_a_at
6.86E-05
CG33525
Negative regulation of transcription, DNA-dependent
Slow up-regulation
1628647_at
1.06E-04
CG33110
Fatty acid biosynthesis; very-long-chain fatty acid metabolism
Slow up-regulation
1628947_s_at
1.06E-04
Ecdysone-inducible gene L2 (M,H)*
Cell adhesion
Acute up-regulation
1629012_at
1.06E-04
period (M,H)*
Long-term memory; circadian rhythm; signal transduction; negative regulation of transcription from RNA polymerase II promoter
Transient down-regulation
1629592_at
1.32E-04
ηTrypsin (M,H)*
Proteolysis
Transient down-regulation
1629617_at
1.44E-04
cabut
Regulation of transcription from RNA polymerase II promoter; JNK cascade; autophagic cell death
Acute up-regulation
1630302_at
1.66E-04
Odorant-binding protein 99d
Transport; autophagic cell death
Slow up-regulation
1631406_at
1.66E-04
CG3106 (M,H)*
Unknown
Transient down-regulation
1632222_a_at
2.25E-04
CG17752
Extracellular transport; cation transport
Slow up-regulation
1632228_at
2.58E-04
CG10505
Response to toxin; extracellular transport; defense response
Slow up-regulation
1633700_at
2.78E-04
antennal protein 10 (M,H)*
Sensory perception of chemical stimulus
Acute down-regulation
1633794_a_at
3.22E-04
antennal protein 5
Signal transduction
Acute down-regulation
1633913_at
3.80E-04
Cytochrome P450-6a8
Electron transport; steroid metabolism; lauric acid metabolism
Slow up-regulation
1634318_at
3.98E-04
lush
Response to ethanol; sensory perception of smell; olfactory behavior
Acute down-regulation
1634591_at
4.38E-04
Rpd3
Regulation of transcription from RNA polymerase II promoter; determination of adult life span; gene silencing
Slow up-regulation
1635815_at
5.47E-04
CG5819 (M,H)*
Transmission of nerve impulse; cell adhesion
Acute up-regulation
1636202_s_at
6.40E-04
CG8931
Transport
Transient up-regulation
1636611_at
6.40E-04
Pheromone-binding protein-related protein 1 (M)*
Signal transduction; sensory perception; response to pheromone
Acute down-regulation
1636771_at
6.40E-04
CG8562
Proteolysis
Slow down-regulation
1638066_at
6.40E-04
CG9238
Glycogen metabolism
Slow up-regulation
1638246_at
6.52E-04
Olfactory-specific E
Signal transduction; response to pheromone; transport
Acute down-regulation
1638452_at
7.01E-04
CG6733
Proteolysis
Slow down-regulation
1639368_at
7.73E-04
CG5804
Lipid transport; cell acyl-CoA homeostasis
Transient down-regulation
1639934_at
7.77E-04
capulet
Actin filament organization; bristle morphogenesis
Slow up-regulation
1640755_at
8.83E-04
Picot
Phosphate metabolism; extracellular transport; cation transport
Slow up-regulation

Transcripts that show sustained altered expression after the first exposure to ethanol are indicated as 'acutely up- or down-regulated genes'. Transcripts that show altered expression only after the second exposure are designated as 'slowly up- or down-regulated genes'. The designation 'transient up-regulation' refers to genes that show increased expression after the first exposure to ethanol, but a return to control levels 2 h later after the second exposure. *Genes that have human (H) and/or mouse (M) orthologues.

Morozova et al. Genome Biology 2006 7:R95   doi:10.1186/gb-2006-7-10-r95