Software
Unraveling transcriptional control and cis-regulatory codes using the software suite GeneACT
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* Corresponding author: Xuedong Liu xuedong.liu@colorado.edu
1 Department of Chemistry and Biochemistry, University of Colorado, 215 UCB, Boulder, Colorado 80309, USA
2 Department of Computer Science, University of Colorado, 430 UCB, Boulder, Colorado 80309, USA
Genome Biology 2006, 7:R97 doi:10.1186/gb-2006-7-10-r97
Published: 25 October 2006Additional files
Additional data file 1:
Table containing the original DNA microarray data generated by Cam and coworkers [33] used for DBSS; the gene IDs of regulated and control gene sets used for the search are listed.
Format: XLS Size: 1.3MB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 2:
Table containing the full list that is summarized in Table 1.
Format: XLS Size: 69KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 3:
Table containing cell cycle regulated genes containing E2F or SRF binding sites.
Format: XLS Size: 40KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 4:
Table containing the full list that is summarized in Table 2; the gene IDs of the miR-124 dataset used for the search are listed.
Format: XLS Size: 30KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 5:
Table containing the original DNA microarray data generated by Tomczak and coworkers [40] used for the DBSS; gene IDs of regulated and control gene sets used for the search are listed.
Format: XLS Size: 2.7MB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 6:
Table containing the full lists summarized in Table 3.
Format: XLS Size: 377KB Download file
This file can be viewed with: Microsoft Excel Viewer