Method
Predicting domain-domain interactions using a parsimony approach
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* Corresponding author: Teresa M Przytycka przytyck@mail.nih.gov
1 National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
2 Center of Informatics, Federal University of Pernambuco, Recife, PE 50732, Brazil
3 Department of Computer Science, University of Maryland, College Park, MD 20742, USA
Genome Biology 2006, 7:R104 doi:10.1186/gb-2006-7-11-r104
Published: 9 November 2006Additional files
Additional data file 1:
The 3,000 top scoring domain pairs with a pw-score cutoff of 0.01 (network reliability 50%).
Format: XLS Size: 500KB Download file
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Additional data file 2:
The 3,000 top scoring domain pairs with a pw-score cutoff of 0.05 (network reliability 50%).
Format: XLS Size: 497KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional data file 3:
The 3,610 domain pairs with a LP-score ≥ 0.4 and a pw-score ≤ 0.1 (network reliability 50%).
Format: TXT Size: 258KB Download file
Additional data file 4:
The 3,944 domain pairs with a LP-score ≥ 0.4 and a pw-score ≤ 0.1 (network reliability 60%).
Format: TXT Size: 296KB Download file
Additional data file 5:
The 783 gold standard domain pairs occurring in our dataset.
Format: XLS Size: 102KB Download file
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Additional data file 6:
The 1,780 interacting protein pairs used in the mediating domain pair prediction experiment.
Format: TXT Size: 19KB Download file
Additional data file 7:
The estimated sensitivity measures for the mediating domain pair prediction experiment.
Format: PDF Size: 14KB Download file
This file can be viewed with: Adobe Acrobat Reader