Figure 1.

PeptideAtlas processing, creation, and interfaces. The first column outlines experiment level processing with SEQUEST [21] and PeptideProphet [22], the second column shows major stages in the construction of a PeptideAtlas [18] using BLAST [24] to obtain coding sequence (CDS) coordinates, and the third column shows the data, business logic, and presentation tiers for a PeptideAtlas.

King et al. Genome Biology 2006 7:R106   doi:10.1186/gb-2006-7-11-r106
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