Table 2 |
|||
|
The number of spectra acquired and peptides identified per experiment |
|||
|
Experiment |
numSpec(P > 0.0) |
numSpec(P > 0.9) |
numDistinctPeptides(cumulative, P > 0.9) |
|
|
|||
|
gricat |
24,833 |
2,585 |
734 |
|
cdc15_cdc23_newICAT |
172,938 |
22,269 |
2,889 |
|
cdc15_cdc23_oldICAT |
156,353 |
8,281 |
3,184 |
|
cdc15_cdc23_ICAT |
21,392 |
3,337 |
3,293 |
|
cdc23_amf_newICAT |
127,673 |
25,861 |
4,096 |
|
contFFE2Murea |
105,686 |
5,473 |
4,430 |
|
FFEY1 |
64,880 |
2,966 |
5,994 |
|
FFEY1Scx |
7,045 |
796 |
6,396 |
|
FFEY2 |
60,140 |
7,159 |
8,877 |
|
PeteryeastIcatstdFFE |
136,563 |
4,680 |
9,375 |
|
TSAAT000c |
217,919 |
43,628 |
11,423 |
|
TSAAT030c |
249,774 |
42,519 |
12,042 |
|
TSAAT060c |
214,851 |
28,089 |
12,424 |
|
TSAAT090c |
198,057 |
31,428 |
13,247 |
|
TSAAT120c |
179,408 |
26,182 |
13,588 |
|
TSAAxT000old |
101,166 |
6,311 |
13,728 |
|
T00 |
94,208 |
9,206 |
13,840 |
|
T30 |
83,758 |
8,758 |
13,935 |
|
T50 |
106,572 |
4,606 |
14,026 |
|
opd00034_YEAST |
24,049 |
4,554 |
14,557 |
|
opd00035_YEAST |
23,715 |
3,931 |
14,862 |
|
peroximalPrep0702 |
24,209 |
3,197 |
15,236 |
|
Comp12vs12sizefrac |
28,926 |
11,703 |
17,553 |
|
pxproteome |
23,720 |
1,552 |
17,724 |
|
Comp12vs12standSCX |
31,652 |
12,103 |
18,966 |
|
YeastICAT |
55,922 |
6,760 |
19,577 |
|
PvM1 |
3,796 |
323 |
19,623 |
|
peroximal_clICAT |
92,721 |
3,693 |
19,778 |
|
Ac30 |
255,937 |
37,873 |
20,025 |
|
yeast |
140,567 |
29,411 |
24,548 |
|
gel_msms |
343,654 |
43,022 |
32,450 |
|
mudpit |
36,599 |
10,811 |
32,859 |
|
ipg_ief |
136,209 |
27,792 |
33,383 |
|
rp_int_selected |
53,358 |
14,669 |
33,684 |
|
rp_mass_selected |
71,151 |
4,881 |
33,857 |
|
sdspage |
92,802 |
19,208 |
34,734 |
|
YM_N14N15_DAYGly |
38,951 |
1,658 |
34,806 |
|
YM_N14N15_DAYSer |
39,315 |
1,862 |
34,843 |
|
YM_N14N15_SCYGly |
37,124 |
1,364 |
34,861 |
|
YM_N14N15_SCYSer |
37,658 |
2,238 |
34,902 |
|
APEX_04-22 |
38,334 |
1,732 |
34,926 |
|
APEX_04-23 |
38,175 |
1,775 |
34,949 |
|
APEX_04-24 |
36,407 |
1,359 |
34,963 |
|
APEX_04-28 |
40,612 |
2,248 |
34,995 |
|
YeastSCXReps |
118,083 |
60,568 |
35,446 |
|
FFE_nonICAT |
21,054 |
6,870 |
36,133 |
|
|
|||
|
Column 1 is the experiment name, column 2 is the number of spectra associated with PeptideProphet probabilities >0, column 3 is the number of spectra associated with PeptideProphet probabilities >0.9, and column 4 is the cumulative number of distinct peptides with PeptideProphet probabilities >0.9. |
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|
King et al. Genome Biology 2006 7:R106 doi:10.1186/gb-2006-7-11-r106 |
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