Table 2

Genes that are differentially expressed in the different pair-wise comparisons possible between the categories

Comparison
Total genes (up/down)
Metabolic genes (%)

Ethanol versus glucose
418 (249/169)
103 (25%)
Ethanol versus glycerol
206 (92/114)
58 (28%)
Glycerol versus glucose
71 (57/14)
12 (17%)

Shown are the number of genes that are differentially expressed in the different pair-wise comparisons possible between the categories, for a cutoff P value in the logit-t test of 0.01. The total number of genes is presented along with the number of upregulated (up) and downregulated (down) genes (shown in parenthesis). The number (and percentage) of metabolic genes identified within the differentially expressed genes is also shown.

David et al. Genome Biology 2006 7:R108   doi:10.1186/gb-2006-7-11-r108