Table 1 |
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|
Feature sources provided by PlantGDB |
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|
Species |
Genomic sequences |
Annotations |
Expressed sequences |
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|
|
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|
Chr |
BAC |
GSS |
GenBank |
yrGATE |
EST |
cDNA |
PUT |
Probe |
|
|
|
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|
A. thaliana |
5 |
- |
- |
34513 |
29 |
622,788 |
66,445 |
144,274 |
251,078 |
|
B. rapa |
- |
52 |
- |
- |
- |
21,222 |
381 |
13,040 |
- |
|
G. max |
- |
66 |
- |
- |
- |
358,702 |
1,116 |
101,998 |
671,762 |
|
L. esculentum |
- |
89 |
- |
467 |
- |
199,873 |
3,291 |
40,966 |
112,528 |
|
L. japonicus |
- |
1374 |
- |
170 |
- |
149,878 |
224 |
43,592 |
- |
|
M. truncatula |
- |
1644 |
- |
18971 |
- |
225,129 |
787 |
54,395 |
673,880 |
|
O. sativa |
12 |
3462 |
- |
68761 |
6 |
406,790 |
35,318 |
141,239 |
631,066 |
|
P. trichocarpa |
- |
173 |
- |
- |
- |
89,943 |
119 |
29,640 |
- |
|
S. bicolor |
- |
41 |
79,343 |
- |
- |
204,208 |
110 |
44,958 |
- |
|
T. aestvum |
- |
57 |
- |
- |
- |
853,621 |
2,386 |
243,326 |
- |
|
Z. mays |
- |
2031 |
294,425 |
936 |
10 |
714,484 |
14,476 |
140,616 |
57,452 |
|
|
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|
Column values represent the number of unique features/sequences made available at PlantGDB. The protein column represents the sum of all cross-species homologous protein alignments. Each expressed sequence may be responsible for multiple features by alignment to multiple loci. BAC, bacterial artificial chromosome; Chr, chromosome; EST, expressed sequence tag; GSS, genome survey sequence; PUT, PlantGDB Unique Transcript. |
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|
Schlueter et al. Genome Biology 2006 7:R111 doi:10.1186/gb-2006-7-11-r111 |
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