Table 3 |
||||||
|
Patterns of nesting among different classes of TE in the D. melanogaster Release 4 genome sequence |
||||||
|
LTR |
Non-LTR |
TIR |
INE-1 |
FB |
Outer total |
|
|
|
||||||
|
LTR |
151 |
39 |
12 |
4 |
1 |
207 |
|
Non-LTR |
46 |
46 |
10 |
17 |
0 |
119 |
|
TIR |
28 |
29 |
32 |
18 |
6 |
113 |
|
INE-1 |
8 |
19 |
8 |
9 |
3 |
47 |
|
FB |
0 |
4 |
0 |
1 |
0 |
5 |
|
Inner total |
233 |
137 |
62 |
49 |
10 |
|
|
|
||||||
|
Observed numbers of 25 possible categories of TE nests from 5 classes of TEs (LTR, non-LTR, TIR, INE-1 and FB) from 491 total nests. |
||||||
|
Bergman et al. Genome Biology 2006 7:R112 doi:10.1186/gb-2006-7-11-r112 |
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