Table 3

The number and percentage of true-positive outliers of the outliers with the highest LOD score for tested amplification techniques

Cutoff level (top number of outliers)

IVTIII

GA

SMART

SM37





True positive

LOD score

True positive

LOD score

True positive

LOD score

True positive

LOD score


1,000

442 (44.2%)

1.646

464 (46.4%)

0.156

653 (65.3)

-0.717

353 (35.3%)

0.932

500

251 (50.2%)

3.486

275 (57.0%)

1.412

385 (67.0%)

-0.315

198 (39.6%)

1.850

100

71 (71.0%)

6.300

69 (69.0%)

3.245

85 (85%)

2.110

51 (51.0%)

3.235


Subkhankulova and Livesey Genome Biology 2006 7:R18   doi:10.1186/gb-2006-7-3-r18

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