Table 4

Summary of expression data obtained by SMART and GA amplification techniques applied to 10 pg of total RNA from NIH 3T3 fibroblast cells

Sample

CR

Number of outliers

True positive

False positive

False negative

True positive, percentage of selected


Replicates

Different samples


GA

1.19

1.62

824

324/824

500/824

1,117/1,441*

39.3%

SMART

0.62

0.54

239

169/239

70/239

1,272/1,441*

70.1%


*Number of selected outliers for unamplified targets.

Subkhankulova and Livesey Genome Biology 2006 7:R18   doi:10.1186/gb-2006-7-3-r18

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