Table 3

Gene Ontology annotation of pea aphid unique transcripts after GoToolBox statistical analysis

Gene Ontology

Putative orthologs set

Drosophila genome

Corrected p value


Biological process

2,397

10,032

Physiological process

2,260

7,986

En (2e-112)

Cellular process

2,201

7,727

En (9e-101)

Regulation of biological process

431

1,583

En (8e-4)

Growth

35

98

En (4e-5)

Pigmentation

19

51

/

Behavior

129

637

/

Reproduction

162

812

/

Development

470

2,227

D (4e-4)

Unknown

49

833

D (2e-46)

Cellular component

1,684

7,428

Cell

1,532

5,150

En (3e-124)

Protein complex

733

1,747

En (9e-98)

Organelle

1,020

2,966

En (3e-84)

Extracellular matrix

23

82

/

Extracellur region

85

450

/

Unknown

73

1,865

D (3e-140)

Molecular function

2,397

10,104

Catalytic activity

1,290

4,070

En (1e-52)

Binding

1,334

4,301

En (8e-49)

Structural molecule activity

298

757

En (8e-23)

Translation regulator activity

54

92

En (5e-12)

Transporter activity

372

1,237

En (9e-8)

Enzyme regulator activity

110

379

/

Antioxydant activity

16

39

/

Motor activity

26

88

/

Transcription regulator activity

187

841

/

Signal transducer activity

215

1,093

D (1e-3)

Unknown

63

1,798

D (1e-144)


The set of A. pisum contigs orthologous to D. melanogaster sequences have been compared to the whole set of D. melanogaster genes using FlyBase Gene ontology terms. The last column indicates the p value of the hypergeometric test. En, enhanced and D, depleted in A. pisum transcripts. /, no bias.

Sabater-Muñoz et al. Genome Biology 2006 7:R21   doi:10.1186/gb-2006-7-3-r21

Open Data