Table 4

Significantly enriched GO terms in antisense transcripts

GO term

Number in

test group

Number in

reference group

GO description


Antisense (732)*

50,874

23

51

Organismal physiological process

50,953

6

2

Sensory perception of light

7,601

6

2

Visual perception

5,816

8

6

Spindle pole body

5,815

12

17

Microtubule organizing center

922

12

17

Spindle pole

43,228

78

317

Non-membrane-bound organelle

43,232

78

317

Intracellular non-membrane-bound organelle

9,767

4

0

Photosynthetic electron transport

16,028

6

3

Rhabdomere

Expressed sense-antisense pairs (120)

5,730

7

42

Nucleolus

6,575

7

44

Amino acid derivative metabolism

42,401

4

9

Biogenic amine biosynthesis

6,520

11

121

Amino acid metabolism

9,063

4

10

Amino acid catabolism

9,310

4

11

Amine catabolism

44,270

4

11

Nitrogen compound catabolism

9,072

5

23

Aromatic amino acid family metabolism

9,308

11

135

Amine metabolism


*The number of transcripts with GO terms assigned is shown in parentheses following the group description. See legend to Table 2 for details.

Ma et al. Genome Biology 2006 7:R22   doi:10.1186/gb-2006-7-3-r22

Open Data