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Open Access Highly Accessed Research

Comparative analysis of Saccharomyces cerevisiae WW domains and their interacting proteins

Jay R Hesselberth1, John P Miller15, Anna Golob1, Jason E Stajich2, Gregory A Michaud3 and Stanley Fields14*

Author Affiliations

1 Department of Genome Sciences, University of Washington, Box 357730, Seattle, WA 98195, USA

2 Department of Molecular Genetics and Microbiology, Duke University, Durham, NC 27710, USA

3 Invitrogen, East Main Street, Branford, CT 06405, USA

4 Department of Medicine, and Howard Hughes Medical Institute, University of Washington, Box 357730, Seattle, WA 98195, USA

5 Current address: Buck Institute, Redwood Boulevard, Novato, CA 94945, USA

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Genome Biology 2006, 7:R30  doi:10.1186/gb-2006-7-4-r30

Published: 10 April 2006

Additional files

Additional data file 1:

The first column corresponds to the name of the WW domain probe, and the second column is the systematic name of its protein interaction partner.

Format: XLS Size: 49KB Download file

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Open Data

Additional data file 2:

Enrichment of GO classifications within the WW domain network.

Format: XLS Size: 41KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 3:

Overlap between the WW domain interaction data set and previously generated protein-protein interaction networks.

Format: XLS Size: 18KB Download file

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Open Data

Additional data file 4:

Motifs were identified using regular expressions (poly-proline 'P{4,}', PY 'PP\w [YF]', LPxY 'LP\w [YF]', PPR 'PP [RK]').

Format: XLS Size: 45KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional data file 5:

Motifs that were previously assessed are highlighted by blue headers.

Format: XLS Size: 37KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data