Comparative analysis of Saccharomyces cerevisiae WW domains and their interacting proteins

Jay R Hesselberth^*¹ , John P Miller^*¹^,5 , Anna Golob¹ , Jason E Stajich² , Gregory A Michaud³ and Stanley Fields¹^,4

¹Department of Genome Sciences, University of Washington, Box 357730, Seattle, WA 98195, USA

²Department of Molecular Genetics and Microbiology, Duke University, Durham, NC 27710, USA

³Invitrogen, East Main Street, Branford, CT 06405, USA

⁴Department of Medicine, and Howard Hughes Medical Institute, University of Washington, Box 357730, Seattle, WA 98195, USA

⁵Current address: Buck Institute, Redwood Boulevard, Novato, CA 94945, USA

author email corresponding author email* Contributed equally

Genome Biology 2006, 7:R30doi:10.1186/gb-2006-7-4-r30


Published:	10 April 2006

Subject areas: Biochemistry and structural biology, Cell biology, Evolution

Additional data file 1:

The first column corresponds to the name of the WW domain probe, and the second column is the systematic name of its protein interaction partner.

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Additional data file 2:

Enrichment of GO classifications within the WW domain network.

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Additional data file 3:

Overlap between the WW domain interaction data set and previously generated protein-protein interaction networks.

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Additional data file 4:

Motifs were identified using regular expressions (poly-proline 'P{4,}', PY 'PP\w [YF]', LPxY 'LP\w [YF]', PPR 'PP [RK]').

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Additional data file 5:

Motifs that were previously assessed are highlighted by blue headers.

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