Genome Biology

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The genome of Rhizobium leguminosarum has recognizable core and accessory components

J Peter W Young*, Lisa C Crossman, Andrew WB Johnston, Nicholas R Thomson, Zara F Ghazoui, Katherine H Hull, Margaret Wexler, Andrew RJ Curson, Jonathan D Todd, Philip S Poole, Tim H Mauchline, Alison K East, Michael A Quail, Carol Churcher, Claire Arrowsmith, Inna Cherevach, Tracey Chillingworth, Kay Clarke, Ann Cronin, Paul Davis, Audrey Fraser, Zahra Hance, Heidi Hauser, Kay Jagels, Sharon Moule, Karen Mungall, Halina Norbertczak, Ester Rabbinowitsch, Mandy Sanders, Mark Simmonds, Sally Whitehead and Julian Parkhill

Genome Biology 2006, 7:R34 doi:10.1186/gb-2006-7-4-r34

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Research   Open Access

Adaptation of Rhizobium leguminosarum to pea, alfalfa and sugar beet rhizospheres investigated by comparative transcriptomics

Vinoy K Ramachandran, Alison K East, Ramakrishnan Karunakaran, J Allan Downie, Philip S Poole Genome Biology 2011, 12:R106 (21 October 2011)

Transcription is measured in Rhizobium leguminosarum grown on roots of a host plant, a non-host legume and a non-leguminous plant

Research article   Open Access

Genomic lineages of Rhizobium etli revealed by the extent of nucleotide polymorphisms and low recombination

José L Acosta, Luis E Eguiarte, Rosa I Santamaría, Patricia Bustos, Pablo Vinuesa, Esperanza Martínez-Romero, Guillermo Dávila, Víctor González BMC Evolutionary Biology 2011, 11:305 (17 October 2011)

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Sequence variability of Rhizobiales orthologs and relationship with physico-chemical characteristics of proteins

Humberto Peralta, Gabriela Guerrero, Alejandro Aguilar, Jaime Mora Biology Direct 2011, 6:48 (4 October 2011)

Diversification of orthologous genes provokes specific physico-chemical changes in proteins of related species, revealing particular trends required to perform their functional roles in the adaptation to niche and intra-cellular conditions.

Research article   Open Access

Characterization and functional analysis of seven flagellin genes in Rhizobium leguminosarum bv. viciae. Characterization of R. leguminosarum flagellins

Dinah D Tambalo, Denise E Bustard, Kate L Del Bel, Susan F Koval, Morgan F Khan, Michael F Hynes BMC Microbiology 2010, 10:219 (17 August 2010)

Research article   Open Access

Horizontal gene transfer and diverse functional constrains within a common replication-partitioning system in Alphaproteobacteria: the repABC operon

Santiago Castillo-Ramírez, Jorge F Vázquez-Castellanos, Víctor González, Miguel A Cevallos BMC Genomics 2009, 10:536 (18 November 2009)

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A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528

David J Studholme, Selena Ibanez, Daniel MacLean, Jeffery L Dangl, Jeff H Chang, John P Rathjen BMC Genomics 2009, 10:395 (24 August 2009)

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Association of virulence plasmid and antibiotic resistance determinants with chromosomal multilocus genotypes in Mexican Salmonella enterica serovar Typhimurium strains

Magdalena Wiesner, Mussaret B Zaidi, Edmundo Calva, Marcos Fernández-Mora, Juan J Calva, Claudia Silva BMC Microbiology 2009, 9:131 (3 July 2009)

Research article   Open Access

The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571

Kyung-Bum Lee, Philippe De Backer, Toshihiro Aono, Chi-Te Liu, Shino Suzuki, Tadahiro Suzuki, Takakazu Kaneko, Manabu Yamada, Satoshi Tabata, Doris M Kupfer, Fares Z Najar, Graham B Wiley, Bruce Roe, Tim T Binnewies, David W Ussery, Wim D'Haeze, Jeroen Den Herder, Dirk Gevers, Danny Vereecke, Marcelle Holsters, Hiroshi Oyaizu BMC Genomics 2008, 9:271 (4 June 2008)

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The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants

Lisa C Crossman, Virginia C Gould, J Maxwell Dow, Georgios S Vernikos, Aki Okazaki, Mohammed Sebaihia, David Saunders, Claire Arrowsmith, Tim Carver, Nicholas Peters, Ellen Adlem, Arnaud Kerhornou, Angela Lord, Lee Murphy, Katharine Seeger, Robert Squares, Simon Rutter, Michael A Quail, Mari-Adele Rajandream, David Harris, Carol Churcher, Stephen D Bentley, Julian Parkhill, Nicholas R Thomson, Matthew B Avison Genome Biology 2008, 9:R74 (17 April 2008)

The complete Stenotrophomonas maltophilia genome sequence suggests that it can act as a reservoir of antibiotic resistance determinants.

Research article   Open Access

Identification of protein secretion systems and novel secreted proteins in Rhizobium leguminosarum bv. viciae

Martin Krehenbrink, J Allan Downie BMC Genomics 2008, 9:55 (29 January 2008)

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Phylogenomics and signature proteins for the alpha Proteobacteria and its main groups

Radhey S Gupta, Amy Mok BMC Microbiology 2007, 7:106 (28 November 2007)