Table 2 |
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|
Phylogenies supported by quartets of orthologous proteins shared between Rlv3841, A. tumefaciens, S. meliloti, and M. loti |
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|
Total proteins |
Number in quartops |
Percentage in quartops |
Phylogeny supported |
|||
|
|
||||||
|
RA-SMa |
RS-AM |
RM-AS |
||||
|
|
||||||
|
Chromosome |
4,736 |
1,798 |
38.0 |
488 |
165 |
92 |
|
pRL12 |
790 |
70 |
8.9 |
7 |
23 |
10 |
|
pRL11 |
635 |
124 |
19.5 |
36 |
22 |
10 |
|
pRL10 |
461 |
28 |
6.1 |
10 |
6 |
2 |
|
pRL9 |
313 |
30 |
9.6 |
9 |
5 |
7 |
|
pRL8 |
140 |
0 |
0 |
0 |
0 |
0 |
|
pRL7 |
188 |
6 |
3.2 |
1 |
1 |
4 |
|
All |
7,263 |
2,056 |
28.3 |
551 |
222 |
125 |
|
|
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|
aNumber of quartops supporting the phylogeny ([R. leguminosarum, A. tumefaciens], [S. meliloti, M. loti]) with at least 99% probability (and likewise for the other two possible topologies). Rlv3841, Rhizobium leguminosarum biovar viciae 3841. |
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|
Young et al. Genome Biology 2006 7:R34 doi:10.1186/gb-2006-7-4-r34 |
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