Table 2

Phylogenies supported by quartets of orthologous proteins shared between Rlv3841, A. tumefaciens, S. meliloti, and M. loti

Total proteins

Number in quartops

Percentage in quartops

Phylogeny supported


RA-SMa

RS-AM

RM-AS


Chromosome

4,736

1,798

38.0

488

165

92

pRL12

790

70

8.9

7

23

10

pRL11

635

124

19.5

36

22

10

pRL10

461

28

6.1

10

6

2

pRL9

313

30

9.6

9

5

7

pRL8

140

0

0

0

0

0

pRL7

188

6

3.2

1

1

4

All

7,263

2,056

28.3

551

222

125


aNumber of quartops supporting the phylogeny ([R. leguminosarum, A. tumefaciens], [S. meliloti, M. loti]) with at least 99% probability (and likewise for the other two possible topologies). Rlv3841, Rhizobium leguminosarum biovar viciae 3841.

Young et al. Genome Biology 2006 7:R34   doi:10.1186/gb-2006-7-4-r34

Open Data