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Resolution: standard / high Figure 8.
Selection of model for bicluster using cross-validation (CV). The ordinate represents
an estimate of prediction error (ErrCV) from tenfold CV (the mean of the error in the 10 leave-out samples used is the CV
error estimate). The shrinkage parameter t allows us to select subsets of predictors continuously. We evaluate our fitted model
for a range of values of t (with t = 0 [the null model] and t = 1 [the ordinary least squares solution]). The error bars denote the standard error
of ErrCV (the standard deviation of the 10 leave-out samples' error estimates). The red line
shows the value of t selected for our final model for this cluster - the most parsimonious model within
1 standard error of the minimum on the ErrCV versus t curve.
Bonneau et al. Genome Biology 2006 7:R36 doi:10.1186/gb-2006-7-5-r36 |