Genome Biology

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A steganalysis-based approach to comprehensive identification and characterization of functional regulatory elements

Guandong Wang and Weixiong Zhang*

Genome Biology 2006, 7:R49 doi:10.1186/gb-2006-7-6-r49

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Proceedings   Open Access

WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures

Jens Lichtenberg, Kyle Kurz, Xiaoyu Liang, Rami Al-ouran, Lev Neiman, Lee J Nau, Joshua D Welch, Edwin Jacox, Thomas Bitterman, Klaus Ecker, Laura Elnitski, Frank Drews, Stephen Lee, Lonnie R Welch BMC Bioinformatics 2010, 11(Suppl 12):S6 (21 December 2010)

Proceedings   Open Access

Characterizing nucleosome dynamics from genomic and epigenetic information using rule induction learning

Ngoc Le, Tu Ho, Dang Tran BMC Genomics 2009, 10(Suppl 3):S27 (3 December 2009)

Research   Open Access Highly Accessed

Variations in the transcriptome of Alzheimer's disease reveal molecular networks involved in cardiovascular diseases

Monika Ray, Jianhua Ruan, Weixiong Zhang Genome Biology 2008, 9:R148 (8 October 2008)

Analysis of microarray data reveals extensive links between Alzheimer’s disease and cardiovascular diseases.

Research article   Open Access Highly Accessed

Identification of novel and candidate miRNAs in rice by high throughput sequencing

Ramanjulu Sunkar, Xuefeng Zhou, Yun Zheng, Weixiong Zhang, Jian-Kang Zhu BMC Plant Biology 2008, 8:25 (29 February 2008)

Methodology article   Open Access

fREDUCE: Detection of degenerate regulatory elements using correlation with expression

Randy Z Wu, Christina Chaivorapol, Jiashun Zheng, Hao Li, Shoudan Liang BMC Bioinformatics 2007, 8:399 (17 October 2007)