Table 5 |
||
|
Endogenous retrovirus INDELs (80 bp to 12.0 kb) in humans and chimpanzees |
||
|
Human |
Chimpanzee |
|
|
|
||
|
Total Gaps |
18,395 |
27,728 |
|
Gaps with interspersed repeats |
9,855 |
15,652 |
|
Gaps containing endogenous retrovirus sequences |
1,495 |
1,608 |
|
Mosaic gaps |
592 |
758 |
|
Single gaps |
903 |
850 |
|
Category 2 gaps |
263 |
293 |
|
Category 1 gaps |
640 |
557 |
|
Deletions |
488 |
478 |
|
Insertions |
79 |
152 |
|
CERV 1/PTERV1 |
- |
85 (25 full ln + 60 solo LTRs) |
|
CERV 2 |
- |
12 (2 full ln + 10 solo LTRs) |
|
CERV 30 (HERVK10) |
78 (8 full ln + 70 solo LTRs) |
43 (1 full ln + 42 solo LTRs) |
|
CERV 3 (HERVS71) |
- |
1 (1 full ln) |
|
CERV 11 (HERVH/LTR7) |
- |
1* |
|
CERV 37 (HERVK11/MER11C) |
- |
1* |
|
CERV 34 (HERVK9/MER9) |
- |
1* |
|
CERV 18 (HERV9) |
- |
7* |
|
CERV 35 (HERVK13/LTR13) |
- |
1* |
|
MER31B |
1* |
- |
|
|
||
|
*Solo LTRs and/or fragmented copies. ln, length. |
||
|
Polavarapu et al. Genome Biology 2006 7:R51 doi:10.1186/gb-2006-7-6-r51 |
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