Table 1 |
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|
Transcription potential, localization, and number of mammalian rCNEs |
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| rCNE typea |
Totalb |
Codingc |
Noncodingd |
|
|
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| Totale |
364,358 |
82,714 |
281,644 |
| Pre-genef |
120,001 |
23,832 |
96,169 |
| Intronicg |
158,722 |
29,002 |
129,720 |
| Post-geneh |
85,521 |
29,766 |
55,755 |
|
|
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|
aType of conserved non-coding sequence (rCNE). bTotal number of rCNEs, including genic and nongenic. cNumber of genic rCNEs: overlapping EMBL proteins, ESTs, GenScan predictions, and Ensembl genes. dNumber of nongenic rCNEs: not overlapping EMBL proteins, ESTs, GenScan, and Ensembl genes. eTotal number of rCNEs, including pre-gene, intronic and post-gene. fNumber of pre-gene rCNEs: rCNEs localized before the translation start of the reference gene. gNumber of intronic rCNEs: rCNEs localized within the introns of the reference gene. hNumber of post-gene rCNEs: rCNEs localized after the translation end of the reference gene. EST, expressed sequence tag; rCNE, regionally conserved non-coding element. |
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Sanges et al. Genome Biology 2006 7:R56 doi:10.1186/gb-2006-7-7-r56 |
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