Table 2 |
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|
Transcription potential, localization, and number of vertebrate |
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| SCE typea |
Totalb |
Codingc |
Noncodingd |
|
|
|||
| Totale |
27,196 |
5,769 |
21,427 |
| Pre-genef |
8,387 |
1,363 |
7,024 |
| Introng |
11,657 |
1,838 |
9,819 |
| Post-geneh |
7,152 |
2,568 |
4,584 |
|
|
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|
aType of SCE. bTotal number of SCEs, including genic and nongenic. cNumber of genic SCEs: overlapping EMBL proteins, ESTs, GenScan predictions, and Ensembl genes. dNumber of nongenic SCEs: not overlapping EMBL proteins, ESTs, GenScan, and Ensembl genes. eTotal number of SCEs, including pre-gene, intronic, and post-gene. fNumber of pre-gene SCEs: SCEs localized before the translation start of the reference gene. gNumber of intronic SCEs: SCEs localized within the introns of the reference gene. hNumber of post-gene SCEs: SCEs localized after the translation end of the reference gene. EST, expressed sequence tag; SCE, shuffled conserved element. |
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|
Sanges et al. Genome Biology 2006 7:R56 doi:10.1186/gb-2006-7-7-r56 |
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