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Detecting transcriptionally active regions using genomic tiling arrays

Gabor Halasz, Marinus F van Batenburg, Joelle Perusse, Sujun Hua, Xiang-Jun Lu, Kevin P White and Harmen J Bussemaker*

Genome Biology 2006, 7:R59 doi:10.1186/gb-2006-7-7-r59

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BioMed Central: 3 citations

Technical Note   Open Access

SigWin-detector: a Grid-enabled workflow for discovering enriched windows of genomic features related to DNA sequences

Márcia A Inda, Marinus F van Batenburg, Marco Roos, Adam SZ Belloum, Dmitry Vasunin, Adianto Wibisono, Antoine HC van Kampen, Timo M Breit BMC Research Notes 2008, 1:63 (8 August 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article   Open Access Highly Accessed

Normalization and experimental design for ChIP-chip data

Shouyong Peng, Artyom A Alekseyenko, Erica Larschan, Mitzi I Kuroda, Peter J Park BMC Bioinformatics 2007, 8:219 (25 June 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 1 comment

Software   Open Access

Tilescope: online analysis pipeline for high-density tiling microarray data

Zhengdong D Zhang, Joel Rozowsky, Hugo YK Lam, Jiang Du, Michael Snyder, Mark Gerstein Genome Biology 2007, 8:R81 (14 May 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | Editor’s summary

Tilescope is a fully integrated and automated new data-processing pipeline for analyzing high-density tiling-array data.

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