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Resolution: standard / high Figure 7.
Network diagram of ThiS/MoaD-like β-grasp domains. The interaction network depicted
here represents the known functional associations (arrows colored orange), the associations
suggested by domain architectures (arrows colored green), and the associations suggested
by gene neighborhood (arrows colored gray) between pairs of domains, as described
in the text. The directionality of the network interactions, as indicated by an arrowhead,
represents the order of a domain pair from the amino- to the carboxyl-terminus of
the domain architecture or from the 5' to 3' end of a gene neighborhood. Lines with
arrowheads at both ends represent domain pairs found both amino-terminal and carboxyl-terminal
to each other in domain architectures or 5' to 3' in operonic contexts. The primary
'hubs' of the network are highlighted prominently. Domains are not exactly to scale.
Selected interactions are encircled by small ellipses connected to the labels describing
the functional role of the interaction. The labels are portrayed as large black ellipses
with white lettering. MBL, metallo-β-lactamase domain; OAHS hyd, O-acetylhomoserine
sulfhydrylase; PDOR, pyridine disulfide oxidoreductase; Rhod, Rhodanese-like domain;
Toluene mono, toluene mono-oxygenase; ZnR, zinc-ribbon containing domain.
Iyer et al. Genome Biology 2006 7:R60 doi:10.1186/gb-2006-7-7-r60 |